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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Cel-018283
Ensembl Protein ID F26H11.2a
UniProt Accession Q6BER5; B1Q274; O45407; O45409; O45410; Q5WRM3; Q95ZU8; Q9NLC1; NU301_CAEEL
Genbank Protein ID CAB04195.1; CAB04197.3; CAB04198.1; CAB54234.4; CAC42289.3; CAH04722.2; CAH60782.1; CAQ16138.1
Protein Name Nucleosome-remodeling factor subunit NURF301-like
Genbank Nucleotide ID Z81515; Z81515; Z81515; Z81515; Z81515; Z81515; Z81515; Z81515
Gene Name nurf-1; F26H11.2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00009180 F26H11.2a F26H11.2a
WBGene00009180 F26H11.2b F26H11.2b
WBGene00009180 F26H11.2c F26H11.2c
WBGene00009180 F26H11.2e F26H11.2e
WBGene00009180 F26H11.2f F26H11.2f
WBGene00009180 F26H11.2g F26H11.2g
WBGene00009180 F26H11.2h F26H11.2h
WBGene00009180 F26H11.2i F26H11.2i
WBGene00009180 F26H11.2k F26H11.2k
WBGene00009180 F26H11.2n F26H11.2n
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
IIDPINAMentha
Post-translational Modifications (PTMs)
dbPAFdbPTMPhospho.ELMPHOSIDA
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 1.20e-18 67.3 1964 2012
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C vC+++++d+k  v C+ C+ wfHp+C++ +   e ++  ++ Cp C++
   Q: 1964 YC-VCQKPYDDTKFYVGCDSCQGWFHPECVGTT-RAEAEQAADYNCPACTR 2012
           8*.******************************.777777777******86 PP
   
Organism Caenorhabditis elegans
Functional Description
(View)

Functional Description


     Histone-binding component of a NURF-like (nucleosome remodeling factor-like) complex, which would catalyze ATP-dependent nucleosome sliding and facilitate transcription of chromatin (Probable). Involved in vulval cell fates.
 Histone-binding component of a NURF-like (nucleosome remodeling factor-like) complex, which would catalyze ATP-dependent nucleosome sliding and facilitate transcription of chromatin (Probable). Involved in vulval cell fates.
Protein Sequence
(Fasta)
MAPPRGRSKR KHPSESGNSS IADSEDPSES TSSSRPRRSR LPKRYFDDGY SPPPTKKRAA 60
QRETPSDAEE VEVKIEEISV RSTPASTPAP KSTSKARGRP KKNPTPPRRK SLKRQEEDII 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018283|E3,PHD|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCTCCAC CACGTGGCCG TTCAAAGCGA AAGCATCCGT CTGAATCCGG AAATTCTTCA 60
ATTGCCGATT CAGAAGACCC ATCAGAATCC ACATCATCAT CTCGTCCACG CCGCAGTCGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018283|E3,PHD|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0103--Bromodomain
KW-0156--Chromatin regulator
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0217--Developmental protein
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001487--Bromodomain
IPR018501--DDT_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50014--BROMODOMAIN_2
PS50827--DDT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF00439--Bromodomain
PF02791--DDT
PF00628--PHD
PRINTS

PR00503--BROMODOMAIN
SMART

SM00297--BROMO
SM00571--DDT
SM00249--PHD
Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification
GO:0007275--P:multicellular organism development
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001431 Ailuropoda melanoleuca 34.32 2.00e-54 208.00
IUUC-Apl-003251 Anas platyrhynchos 34.43 2.00e-52 201.00
IUUC-Aca-005148 Anolis carolinensis 39.53 2.00e-37 150.00
IUUC-Ame-010924 Astyanax mexicanus 38.10 2.00e-52 201.00
IUUC-Bta-012701 Bos taurus 34.32 1.00e-54 208.00
IUUC-Bol-015574 Brassica oleracea 28.57 7.00e-11 59.30
IUUC-Bra-017900 Brassica rapa 27.47 3.00e-10 57.80
IUUC-Cja-018809 Callithrix jacchus 40.70 6.00e-39 154.00
IUUC-Cfa-021079 Canis familiaris 34.32 2.00e-54 208.00
IUUC-Cpo-021892 Cavia porcellus 40.70 2.00e-38 154.00
IUUC-Cre-022934 Chlamydomonas reinhardtii 37.74 1.00e-08 52.00
IUUC-Csa-023142 Chlorocebus sabaeus 34.32 4.00e-54 207.00
IUUC-Cho-024758 Choloepus hoffmanni 34.32 2.00e-54 207.00
IUUC-Cin-025225 Ciona intestinalis 37.31 1.00e-43 170.00
IUUC-Csv-026235 Ciona savignyi 36.99 2.00e-44 170.00
IUUC-Cne-026894 Cryptococcus neoformans 44.64 2.00e-10 59.30
IUUC-Dre-028054 Danio rerio 37.12 2.00e-54 207.00
IUUC-Dno-029508 Dasypus novemcinctus 39.39 2.00e-54 207.00
IUUC-Dor-030950 Dipodomys ordii 40.70 2.00e-38 154.00
IUUC-Dse-031262 Dothistroma septosporum 44.90 2.00e-08 53.10
IUUC-Dme-032140 Drosophila melanogaster 35.17 2.00e-52 201.00
IUUC-Ete-032789 Echinops telfairi 34.32 3.00e-55 210.00
IUUC-Eca-033972 Equus caballus 34.32 1.00e-54 208.00
IUUC-Eeu-034541 Erinaceus europaeus 33.73 3.00e-54 207.00
IUUC-Fca-036272 Felis catus 34.32 2.00e-54 208.00
IUUC-Fal-037141 Ficedula albicollis 34.43 2.00e-52 201.00
IUUC-Gmo-038548 Gadus morhua 34.16 3.00e-51 197.00
IUUC-Ggr-040000 Gaeumannomyces graminis 37.35 3.00e-11 61.60
IUUC-Gga-040833 Gallus gallus 33.92 6.00e-52 199.00
IUUC-Gac-041530 Gasterosteus aculeatus 34.37 2.00e-56 214.00
IUUC-Ggo-045377 Gorilla gorilla 40.70 4.00e-39 155.00
IUUC-Hsa-046878 Homo sapiens 34.32 2.00e-54 208.00
IUUC-Hvu-047723 Hordeum vulgare 36.11 6.00e-11 59.70
IUUC-Itr-048740 Ictidomys tridecemlineatus 40.70 2.00e-38 154.00
IUUC-Lch-049744 Latimeria chalumnae 34.35 5.00e-55 210.00
IUUC-Loc-052694 Lepisosteus oculatus 38.96 2.00e-52 201.00
IUUC-Laf-054223 Loxodonta africana 34.32 2.00e-54 207.00
IUUC-Mcc-054601 Macaca mulatta 34.32 2.00e-54 208.00
IUUC-Mga-060204 Meleagris gallopavo 34.46 3.00e-52 201.00
IUUC-Mmr-061332 Microcebus murinus 34.62 6.00e-55 209.00
IUUC-Mdo-062245 Monodelphis domestica 35.03 5.00e-55 209.00
IUUC-Mmu-063744 Mus musculus 34.32 1.00e-54 208.00
IUUC-Mac-064749 Musa acuminata 36.07 1.00e-09 54.70
IUUC-Mpu-066289 Mustela putorius furo 34.32 3.00e-54 207.00
IUUC-Mlu-066991 Myotis lucifugus 34.32 2.00e-54 208.00
IUUC-Ncr-068795 Neurospora crassa 38.55 2.00e-12 66.20
IUUC-Nle-070095 Nomascus leucogenys 34.32 2.00e-54 208.00
IUUC-Ont-071778 Oreochromis niloticus 35.51 4.00e-54 207.00
IUUC-Oan-073261 Ornithorhynchus anatinus 38.10 2.00e-52 201.00
IUUC-Ocu-074848 Oryctolagus cuniculus 34.32 5.00e-55 209.00
IUUC-Obr-076353 Oryza brachyantha 36.84 1.00e-10 60.80
IUUC-Olo-080461 Oryza longistaminata 28.75 1.00e-10 59.30
IUUC-Ome-081714 Oryza meridionalis 36.84 2.00e-10 57.40
IUUC-Ola-086685 Oryzias latipes 35.40 2.00e-55 211.00
IUUC-Olu-087802 Ostreococcus lucimarinus 45.83 6.00e-11 58.90
IUUC-Oga-088994 Otolemur garnettii 34.62 5.00e-55 209.00
IUUC-Oar-090271 Ovis aries 34.32 6.00e-55 209.00
IUUC-Ptr-090821 Pan troglodytes 34.32 2.00e-54 208.00
IUUC-Pan-092346 Papio anubis 44.86 6.00e-32 131.00
IUUC-Psi-093425 Pelodiscus sinensis 34.23 1.00e-56 215.00
IUUC-Pma-094355 Petromyzon marinus 32.83 2.00e-53 204.00
IUUC-Pno-094853 Phaeosphaeria nodorum 39.29 9.00e-10 57.80
IUUC-Pfo-096995 Poecilia formosa 39.83 2.00e-55 211.00
IUUC-Pab-098056 Pongo abelii 34.32 1.00e-54 208.00
IUUC-Pop-099371 Populus trichocarpa 36.67 3.00e-08 53.90
IUUC-Pca-100922 Procavia capensis 30.22 2.00e-27 118.00
IUUC-Pva-103167 Pteropus vampyrus 34.62 5.00e-55 209.00
IUUC-Pgr-103292 Puccinia graminis 37.74 1.00e-07 49.30
IUUC-Ptt-104009 Puccinia triticina 35.71 9.00e-10 57.00
IUUC-Rno-105749 Rattus norvegicus 39.39 3.00e-54 207.00
IUUC-Sha-106874 Sarcophilus harrisii 34.91 4.00e-55 210.00
IUUC-Sja-107953 Schizosaccharomyces japonicus 46.55 7.00e-13 67.00
IUUC-Spo-108245 Schizosaccharomyces pombe 45.61 3.00e-12 65.10
IUUC-Sly-111896 Solanum lycopersicum 41.77 9.00e-10 58.90
IUUC-Stu-112181 Solanum tuberosum 42.55 2.00e-09 54.70
IUUC-Sar-113725 Sorex araneus 34.62 5.00e-55 209.00
IUUC-Sbi-114633 Sorghum bicolor 23.81 2.00e-14 74.30
IUUC-Tgu-117339 Taeniopygia guttata 38.95 1.00e-36 147.00
IUUC-Tru-118594 Takifugu rubripes 34.22 5.00e-57 216.00
IUUC-Tni-120313 Tetraodon nigroviridis 33.33 2.00e-54 207.00
IUUC-Tvi-122536 Trichoderma virens 42.17 2.00e-14 72.00
IUUC-Tbe-127684 Tupaia belangeri 35.11 5.00e-43 170.00
IUUC-Ttr-128434 Tursiops truncatus 34.32 3.00e-54 207.00
IUUC-Vpa-130338 Vicugna pacos 40.70 2.00e-38 154.00
IUUC-Xtr-132434 Xenopus tropicalis 35.91 2.00e-50 194.00
IUUC-Xma-133765 Xiphophorus maculatus 40.26 5.00e-56 213.00
Created Date 25-Jun-2017

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