iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006125

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348713

Gene Name

ARALYDRAFT_889762

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_102556.1	scaffold_102556.1	scaffold_102556.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	28.35	2.00e-07	52.00	IUUC-Cel-018593

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNAPPENEVC SICHGHFNTP CQSNCSHWFC GNCIMLVWRH GSTLRPCKCP LCRRPISLLV 60
PSEETVRSRN DATVSEVLHD VETYNRVFGG QSSGLIQDAR SSLLTPKLLR EMMDPRRTLP 120

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Nucleotide Sequence
(Fasta)

AATAGCAGAG GAAGACGACG ATGAATGCGC CACCGGAGAA CGAAGTTTGT TCGATATGCC 60
ATGGCCACTT CAACACTCCT TGCCAATCCA ATTGCTCTCA CTGGTTCTGC GGTACGATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR010652--DUF1232
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF06803--DUF1232

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_889762

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016605	Brassica oleracea	79.46	5.00e-69	252.00
IUUC-Cel-018593	Caenorhabditis elegans	29.49	9.00e-11	60.10
IUUC-Cho-024304	Choloepus hoffmanni	37.80	5.00e-13	67.40
IUUC-Cin-025256	Ciona intestinalis	33.52	2.00e-14	72.00
IUUC-Gmo-039635	Gadus morhua	32.97	2.00e-16	79.00
IUUC-Gma-043890	Glycine max	64.67	3.00e-53	200.00
IUUC-Pno-094854	Phaeosphaeria nodorum	38.60	2.00e-06	46.60
IUUC-Pte-104279	Pyrenophora teres	40.74	3.00e-06	46.60
IUUC-Pyt-104429	Pyrenophora triticirepentis	40.74	2.00e-06	46.60
IUUC-Tca-121028	Theobroma cacao	69.73	1.00e-58	218.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence