iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000852

Ensembl Protein ID

EMT11655

UniProt Accession

M8BDA4; M8BDA4_AEGTA

Genbank Protein ID

EMT11655.1

Protein Name

RING-H2 finger protein ATL3C

Genbank Nucleotide ID

KD553572

Gene Name

F775_08911

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_08911	EMT11655	EMT11655

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.80e-08	34.5	181	222

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplv.lp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+ ++ +p v lp C H+fh+ C+  w       sk+ +CP+Cr
   Q: 181  CAICLDGLEGEPAVeLPaCVHAFHRRCISTW------FSKKTTCPICR 222
           ********6666653779*************......999999****8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MAMPKHPADG AVVDRRLDAT TICFSEEPAP VASDGGSHQF ALRVTCSVTR SLEFRRSGRH 60
PKVVLQKYTK AGCDSAITFP VGDLSMLQSD SACQGALRGM LAELRQLREL HLDDDEWDAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATGC CGAAGCACCC CGCGGACGGC GCAGTAGTCG ACCGCCGGCT CGACGCGACC 60
ACGATATGCT TCTCCGAGGA GCCCGCGCCG GTAGCCTCCG ACGGCGGCAG CCATCAGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0479--Metal-binding
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ats:F775_08911

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025371	Ciona intestinalis	40.58	2.00e-08	52.40
IUUC-Lpe-051252	Leersia perrieri	28.37	5.00e-11	60.80
IUUC-Oba-075627	Oryza barthii	33.09	6.00e-12	63.50
IUUC-Obr-076495	Oryza brachyantha	41.25	2.00e-11	60.50
IUUC-Ogl-077839	Oryza glaberrima	33.09	6.00e-12	63.50
IUUC-Ogu-078421	Oryza glumaepatula	33.09	8.00e-12	63.50
IUUC-Oin-079842	Oryza indica	34.09	2.00e-12	64.30
IUUC-Olo-081073	Oryza longistaminata	33.09	8.00e-12	63.50
IUUC-Ome-081305	Oryza meridionalis	33.09	5.00e-12	63.90
IUUC-Opu-083769	Oryza punctata	33.33	2.00e-11	62.00
IUUC-Oru-084899	Oryza rufipogon	33.09	7.00e-12	63.50
IUUC-Osa-085635	Oryza sativa	33.09	7.00e-12	63.50
IUUC-Sce-106223	Saccharomyces cerevisiae	52.94	4.00e-10	56.60
IUUC-Sit-110662	Setaria italica	36.04	1.00e-29	122.00
IUUC-Tae-123741	Triticum aestivum	95.34	3.00e-131	459.00
IUUC-Tur-126039	Triticum urartu	36.73	1.00e-18	85.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence