iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112141

Ensembl Protein ID

PGSC0003DMT400081469

UniProt Accession

M1D4V0; M1D4V0_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400031865	PGSC0003DMT400081469	PGSC0003DMT400081469

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.70e-07	31.8	288	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC++     +  + lpCgH +h dC+ +w         + +CP+Cr
   Q: 288  CAICKDVVnvGEMAKNLPCGHGYHDDCIVQW------LGSRNSCPVCR 329
           ****987755333566***************......99********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAETPSVPAP TGSDPDYWCY QCETRVAVET LPDLPADVIC SNCKSGFVES IPSRVVSVSP 60
VTASTDQIDD PAFGNQFIQV LRLIAEAARD NDAPPPPPSE HADPTDDDFL RVELDGWGND 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATAAGAGT ACTTATTAGT CCTCTTTTCT GCTTTTTGTT TCCCCCACCA AAAGTCTCCA 60
ACAATGGCCG AGACCCCTTC AGTCCCTGCA CCAACCGGGT CGGATCCTGA TTACTGGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0008270--F:zinc ion binding
GO:0016567--P:protein ubiquitination

KEGG

sot:102583669

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006264	Arabidopsis lyrata	63.95	2.00e-46	178.00
IUUC-Ath-007318	Arabidopsis thaliana	66.22	6.00e-47	179.00
IUUC-Bol-015980	Brassica oleracea	55.64	3.00e-26	110.00
IUUC-Bra-017830	Brassica rapa	56.12	1.00e-33	135.00
IUUC-Cin-025410	Ciona intestinalis	44.16	5.00e-15	72.00
IUUC-Gma-044226	Glycine max	75.54	3.00e-60	224.00
IUUC-Mtr-058545	Medicago truncatula	73.91	6.00e-58	216.00
IUUC-Mdo-062131	Monodelphis domestica	44.32	1.00e-19	88.20
IUUC-Oni-082821	Oryza nivara	50.86	1.00e-32	130.00
IUUC-Ppe-101680	Prunus persica	68.49	5.00e-55	207.00
IUUC-Ptt-103768	Puccinia triticina	36.75	6.00e-16	77.80
IUUC-Smo-109226	Selaginella moellendorffii	58.70	1.00e-41	163.00
IUUC-Sly-110882	Solanum lycopersicum	84.27	2.00e-119	421.00
IUUC-Sbi-113878	Sorghum bicolor	48.74	2.00e-27	114.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence