iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__1128__AT3G10910.1	fgenesh2_kg.3__1128__AT3G10910.1	fgenesh2_kg.3__1128__AT3G10910.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.70e-09	36.8	114	156

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl df+dg  ++vlp C+H fh  C+  w         + +CP+Cr
   Q: 114  CLICLGDFEDGekVRVLPkCNHGFHVRCIDTW------LLSRSSCPTCR 156
           ********77666*******************......888899****8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGRLLLEPQA NAPADANPKP KGGINDTYFD TNMVIILAAL LCALICALSL NSALRCVLRI 60
TRRFTSDDQV ANASNANANS RRLASATGLK KQALKQIPVG LYGSGIIDMK ATECLICLGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGTCGCCC ATAAATTCAT TTATGACTCT TTTTTATCAC AATCTTGACA TAAATATTTT 60
TGCCTCCCCT CATCTTTACA CACAAGTCAC GACTCACGAG ACAGAAACAA ATCAGAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_478427

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007408	Arabidopsis thaliana	95.60	2.00e-69	254.00
IUUC-Bol-015294	Brassica oleracea	85.80	3.00e-62	229.00
IUUC-Bra-016992	Brassica rapa	84.62	8.00e-62	228.00
IUUC-Cel-018152	Caenorhabditis elegans	43.94	6.00e-14	69.30
IUUC-Cin-025246	Ciona intestinalis	49.02	1.00e-11	60.10
IUUC-Csv-026239	Ciona savignyi	37.36	4.00e-12	63.50
IUUC-Hvu-047249	Hordeum vulgare	50.44	1.00e-25	108.00
IUUC-Mac-065481	Musa acuminata	57.58	3.00e-36	144.00
IUUC-Pop-099512	Populus trichocarpa	59.88	3.00e-35	140.00
IUUC-Ppe-101375	Prunus persica	60.13	2.00e-36	144.00
IUUC-Sly-111371	Solanum lycopersicum	55.87	5.00e-39	153.00
IUUC-Stu-112741	Solanum tuberosum	59.38	2.00e-37	148.00
IUUC-Sbi-114132	Sorghum bicolor	77.78	5.00e-19	86.70
IUUC-Tur-126629	Triticum urartu	59.52	6.00e-27	111.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence