iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111333

Ensembl Protein ID

Solyc08g069050.2.1

UniProt Accession

K4CMC5; K4CMC5_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc08g069050.2	Solyc08g069050.2.1	Solyc08g069050.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.20e-73	249.0	163	468

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqq 90
           +Gl N gN+C+ N vLQcL+ +++l  +lle  + ++++++       ++l+++q+ +e   +++++ +sp ++l+ l ++  ++   +q+
   Q: 163  CGLLNCGNSCFANVVLQCLTYTKPLVAYLLEkGHLRECRRN-----GWCFLCEFQHHVERA-SRSQQPFSPINILSRLPNIGGNLGYGKQE 247
           7******************************5555666655.....67**********999.999************************** PP
   S: 91   DaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkee 181
           Da+Ef++f +d +++ +         +e++ +       +   +++++++li+++F+g+l+sq++c ec nvs++ e+++dl+++++g+ e
   Q: 248  DAHEFMRFAIDMMQSVC--------LDEFGGE-------KAVPPNTQETTLIQHIFGGHLQSQVICTECSNVSNQIENMMDLTVEIHGDAE 323
           *****************........3444444.......789999*********************************************7 PP
   S: 182  tkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekq 272
               sl++cL++ft++e l+g+n y+c+ c+++++a k+l++++ P++L++ LkRf    + ++  k+nk+v+fp++Ldl p+++++ ++ 
   Q: 324  ----SLEECLDQFTAREWLDGDNLYKCDGCNDYVKAWKRLMVRRAPNILTIALKRF----QSGRFGKLNKRVTFPETLDLHPYMSETGDG- 405
           ....8***************************************************....346668********************6666. PP
   S: 273  kekkkYeLiavvvHsGslss...GHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
             +++Y+L+av+vH   l+    GHY++y+k+ +g+W ++dD kV +v+ +evl+   + aY+l+Y r
   Q: 406  --NDIYKLYAVIVHVDMLNAsffGHYICYIKDFRGSWHRIDDCKVVKVDLDEVLS---QGAYMLLYSR 468
           ..89**********995554455********************************...********87 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MHVAVDLNSY LQFVLTAIAV IVTLVYLVKS TASKYFVVDD DSNFESSASP TAGFVDRRMD 60
PATPEGCAVC SNVTKKQCSR CKMVKYCSEA CQRSHWNSGH KFKCKDLQLS GKGSSLHGRK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCAAATTA GTCGAATTCA TCAATGGAGG AATTGAAACC CTAGGCTGCA ATTTATGAGA 60
GAGCGTTGTT ATCTGAGGAA GAAGAAAGTG TTTTTTCGCA TAGTAGGAAA AAGTATAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sly:101247350

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001055	Aegilops tauschii	69.89	9.00e-153	533.00
IUUC-Atr-002997	Amborella trichopoda	59.26	8.00e-169	586.00
IUUC-Aly-005942	Arabidopsis lyrata	60.75	6.00e-180	623.00
IUUC-Ath-007334	Arabidopsis thaliana	57.94	0.00e+00	674.00
IUUC-Bdi-014660	Brachypodium distachyon	63.91	3.00e-161	561.00
IUUC-Bol-015083	Brassica oleracea	62.64	0.00e+00	643.00
IUUC-Bra-017569	Brassica rapa	63.96	0.00e+00	647.00
IUUC-Cin-025230	Ciona intestinalis	41.50	1.00e-57	216.00
IUUC-Cne-027049	Cryptococcus neoformans	30.33	5.00e-36	145.00
IUUC-Gma-042958	Glycine max	65.71	0.00e+00	700.00
IUUC-Hvu-047620	Hordeum vulgare	63.72	8.00e-167	580.00
IUUC-Lpe-051385	Leersia perrieri	60.48	2.00e-142	499.00
IUUC-Mtr-057748	Medicago truncatula	62.25	0.00e+00	701.00
IUUC-Mac-065204	Musa acuminata	65.75	0.00e+00	651.00
IUUC-Oba-075131	Oryza barthii	68.16	5.00e-161	561.00
IUUC-Obr-076763	Oryza brachyantha	66.21	9.00e-172	596.00
IUUC-Ogl-077264	Oryza glaberrima	66.98	3.00e-171	595.00
IUUC-Ogu-078646	Oryza glumaepatula	67.21	7.00e-172	597.00
IUUC-Oin-079613	Oryza indica	63.18	2.00e-158	552.00
IUUC-Olo-080250	Oryza longistaminata	67.21	3.00e-172	598.00
IUUC-Ome-081416	Oryza meridionalis	67.13	2.00e-172	598.00
IUUC-Oni-082102	Oryza nivara	66.98	6.00e-171	594.00
IUUC-Opu-083135	Oryza punctata	66.98	4.00e-170	591.00
IUUC-Oru-084644	Oryza rufipogon	67.21	8.00e-172	597.00
IUUC-Osa-086195	Oryza sativa	67.97	9.00e-164	570.00
IUUC-Ppa-095936	Physcomitrella patens	58.28	7.00e-138	484.00
IUUC-Pop-099611	Populus trichocarpa	66.47	0.00e+00	704.00
IUUC-Ppe-101845	Prunus persica	68.64	0.00e+00	645.00
IUUC-Smo-109625	Selaginella moellendorffii	54.82	1.00e-142	499.00
IUUC-Sit-109798	Setaria italica	66.90	8.00e-171	593.00
IUUC-Stu-112696	Solanum tuberosum	97.41	0.00e+00	690.00
IUUC-Sbi-113982	Sorghum bicolor	65.81	2.00e-168	585.00
IUUC-Tca-121521	Theobroma cacao	67.39	0.00e+00	722.00
IUUC-Tae-123937	Triticum aestivum	65.09	2.00e-166	578.00
IUUC-Tur-126423	Triticum urartu	69.89	5.00e-153	534.00
IUUC-Vvi-130927	Vitis vinifera	55.90	0.00e+00	734.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence