iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pab-097677

Ensembl Protein ID

ENSPPYP00000002263.2

UniProt Accession

H2N9B8; H2N9B8_PONAB

Genbank Protein ID

ENSPPYP00000002263

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01047532

Gene Name

CHD5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000001952.2	ENSPPYT00000002331.2	ENSPPYP00000002263.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.50e-17	61.5	317	362

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  e+ p+ + w Cp C++
   Q: 317  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LEKAPEGK-WSCPHCEK 362
           79*********....9******************.*******7.******86 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

EEDGGLEAFD DFFPVEPVSL PKKKKPKKLK ENKCKGKRKK KEGSNDELSE NEEDLEEKSE 60
SEGSDYSPNK KKKKKLKDKK EKKAKRKKKD EDEDDNDDGC LKEPKSSGQL MAEWGLDDVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGCCGGGAG GTGAGGTGAT GTCACACAGT CCCTAGAGCT GGGGCTCCTG TCCTGTGTTC 60
TCCCACTTCA CCGGGTTTGG GGAGGGCAGG GTGGCTGTGA CCTGGCACAG ATGGGTGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0016607--C:nuclear speck
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0098532--P:histone H3-K27 trimethylation
GO:0060850--P:regulation of transcription involved in cell fate commitment

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	92.97	0.00e+00	2914.00
IUUC-Apl-003406	Anas platyrhynchos	84.22	0.00e+00	2103.00
IUUC-Aca-004671	Anolis carolinensis	86.79	0.00e+00	2232.00
IUUC-Aly-005645	Arabidopsis lyrata	39.10	4.00e-152	533.00
IUUC-Ath-007406	Arabidopsis thaliana	40.11	1.00e-156	548.00
IUUC-Ame-011883	Astyanax mexicanus	82.04	0.00e+00	2125.00
IUUC-Bta-012951	Bos taurus	93.94	0.00e+00	2127.00
IUUC-Bol-016073	Brassica oleracea	40.79	1.00e-156	548.00
IUUC-Bra-016724	Brassica rapa	41.02	2.00e-157	551.00
IUUC-Cel-018683	Caenorhabditis elegans	53.44	0.00e+00	1480.00
IUUC-Cja-018871	Callithrix jacchus	97.98	0.00e+00	2451.00
IUUC-Cfa-021063	Canis familiaris	98.44	0.00e+00	2368.00
IUUC-Cpo-022083	Cavia porcellus	95.94	0.00e+00	2382.00
IUUC-Csa-023084	Chlorocebus sabaeus	99.65	0.00e+00	2565.00
IUUC-Csv-025847	Ciona savignyi	58.39	0.00e+00	1346.00
IUUC-Dno-029923	Dasypus novemcinctus	96.17	0.00e+00	1962.00
IUUC-Dme-032150	Drosophila melanogaster	61.58	0.00e+00	1421.00
IUUC-Eca-034372	Equus caballus	93.07	0.00e+00	2878.00
IUUC-Fca-036048	Felis catus	92.05	0.00e+00	2844.00
IUUC-Fal-037282	Ficedula albicollis	91.08	0.00e+00	2301.00
IUUC-Gga-040607	Gallus gallus	93.02	0.00e+00	2021.00
IUUC-Ggo-044514	Gorilla gorilla	99.67	0.00e+00	2553.00
IUUC-Hsa-046181	Homo sapiens	99.67	0.00e+00	2538.00
IUUC-Laf-053749	Loxodonta africana	97.92	0.00e+00	2501.00
IUUC-Mcc-055856	Macaca mulatta	99.65	0.00e+00	2560.00
IUUC-Mga-059630	Meleagris gallopavo	90.85	0.00e+00	2314.00
IUUC-Mmr-060986	Microcebus murinus	94.36	0.00e+00	2935.00
IUUC-Mmu-063644	Mus musculus	96.12	0.00e+00	2450.00
IUUC-Mpu-066528	Mustela putorius furo	94.86	0.00e+00	2427.00
IUUC-Nle-069824	Nomascus leucogenys	97.93	0.00e+00	2339.00
IUUC-Oga-088775	Otolemur garnettii	98.24	0.00e+00	2429.00
IUUC-Oar-090301	Ovis aries	95.60	0.00e+00	2364.00
IUUC-Ptr-090586	Pan troglodytes	97.11	0.00e+00	2506.00
IUUC-Pan-092282	Papio anubis	99.72	0.00e+00	2563.00
IUUC-Psi-093007	Pelodiscus sinensis	90.46	0.00e+00	2300.00
IUUC-Ppa-095381	Physcomitrella patens	39.98	0.00e+00	722.00
IUUC-Pfo-096802	Poecilia formosa	80.18	0.00e+00	2071.00
IUUC-Pca-100559	Procavia capensis	92.87	0.00e+00	2322.00
IUUC-Rno-105378	Rattus norvegicus	96.26	0.00e+00	2405.00
IUUC-Sha-107350	Sarcophilus harrisii	90.67	0.00e+00	2360.00
IUUC-Smo-108946	Selaginella moellendorffii	36.88	4.00e-165	576.00
IUUC-Ssc-116303	Sus scrofa	99.27	0.00e+00	2227.00
IUUC-Tgu-116779	Taeniopygia guttata	84.46	0.00e+00	2110.00
IUUC-Tru-117597	Takifugu rubripes	78.11	0.00e+00	2340.00
IUUC-Ttr-128301	Tursiops truncatus	95.22	0.00e+00	2424.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence