iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Laf-054215

UUCD1 version

UUC-LoA-00196

Ensembl Protein ID

ENSLAFP00000004679.3

UniProt Accession

G3SWI2; G3SWI2_LOXAF

Protein Name

Uncharacterized protein

Gene Name

TRIM54

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000005576.3	ENSLAFT00000005576.3	ENSLAFP00000004679.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.30e-09	37.5	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f++++++lpC+H  +++C + +                ss ++frCP Cr
   Q: 26   CPICLEMFSKPVVILPCQHNLCRKCANDVfqasnplwqsrGSTTVSSGGRFRCPSCR 82
           *************************87777777888899977777899********8 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MNFAVGFKPL LGDAHSMDNL EKQLICPICL EMFSKPVVIL PCQHNLCRKC ANDVFQASNP 60
LWQSRGSTTV SSGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESSRPLHSKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTTCG CAGTGGGTTT CAAGCCGCTG CTAGGGGATG CACACAGCAT GGACAACCTG 60
GAGAAGCAGC TCATCTGCCC CATCTGCCTG GAGATGTTCT CCAAACCGGT GGTGATCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR033492--TRIM54
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005874--C:microtubule
GO:0005875--C:microtubule associated complex
GO:0008270--F:zinc ion binding
GO:0055001--P:muscle cell development
GO:0007026--P:negative regulation of microtubule depolymerization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002282	Ailuropoda melanoleuca	97.10	4.00e-134	470.00
IUUC-Bgr-012082	Blumeria graminis	34.72	2.00e-08	55.10
IUUC-Bta-013385	Bos taurus	97.60	4.00e-178	617.00
IUUC-Cja-019697	Callithrix jacchus	78.06	4.00e-135	473.00
IUUC-Cfa-020995	Canis familiaris	98.18	6.00e-170	589.00
IUUC-Cpo-021913	Cavia porcellus	95.60	0.00e+00	667.00
IUUC-Csa-023342	Chlorocebus sabaeus	97.22	0.00e+00	637.00
IUUC-Cin-025224	Ciona intestinalis	51.46	1.00e-92	333.00
IUUC-Csv-026374	Ciona savignyi	50.89	1.00e-80	292.00
IUUC-Dre-027562	Danio rerio	69.88	3.00e-143	501.00
IUUC-Dno-029582	Dasypus novemcinctus	97.57	4.00e-171	593.00
IUUC-Dor-031139	Dipodomys ordii	95.29	0.00e+00	651.00
IUUC-Eca-033645	Equus caballus	98.20	1.00e-179	622.00
IUUC-Eeu-035333	Erinaceus europaeus	69.41	1.00e-116	412.00
IUUC-Fca-035865	Felis catus	97.88	0.00e+00	629.00
IUUC-Fal-036978	Ficedula albicollis	82.37	4.00e-168	583.00
IUUC-Gga-040452	Gallus gallus	77.60	5.00e-163	566.00
IUUC-Ggo-044467	Gorilla gorilla	86.07	8.00e-173	599.00
IUUC-Hsa-046379	Homo sapiens	96.11	2.00e-178	617.00
IUUC-Itr-047912	Ictidomys tridecemlineatus	96.13	0.00e+00	638.00
IUUC-Lch-050029	Latimeria chalumnae	78.35	2.00e-153	534.00
IUUC-Loc-051801	Lepisosteus oculatus	80.28	2.00e-135	474.00
IUUC-Mcc-055027	Macaca mulatta	87.31	3.00e-179	620.00
IUUC-Meu-056412	Macropus eugenii	95.22	1.00e-168	585.00
IUUC-Mmr-060920	Microcebus murinus	97.22	0.00e+00	650.00
IUUC-Mdo-062832	Monodelphis domestica	96.05	5.00e-165	573.00
IUUC-Mmu-063707	Mus musculus	94.78	0.00e+00	626.00
IUUC-Mlu-067653	Myotis lucifugus	82.26	4.00e-139	486.00
IUUC-Nle-069020	Nomascus leucogenys	96.39	0.00e+00	632.00
IUUC-Opr-070577	Ochotona princeps	78.17	9.00e-143	499.00
IUUC-Ont-072491	Oreochromis niloticus	62.54	6.00e-121	427.00
IUUC-Oan-073101	Ornithorhynchus anatinus	95.15	3.00e-173	600.00
IUUC-Ocu-074454	Oryctolagus cuniculus	95.58	8.00e-180	622.00
IUUC-Oga-088361	Otolemur garnettii	97.14	3.00e-176	610.00
IUUC-Oar-089950	Ovis aries	81.08	2.00e-140	491.00
IUUC-Ptr-090785	Pan troglodytes	85.82	1.00e-172	598.00
IUUC-Pan-092344	Papio anubis	97.50	0.00e+00	640.00
IUUC-Pab-098322	Pongo abelii	93.06	8.00e-173	599.00
IUUC-Pca-100385	Procavia capensis	77.10	3.00e-121	427.00
IUUC-Rno-105134	Rattus norvegicus	95.04	0.00e+00	671.00
IUUC-Sha-106768	Sarcophilus harrisii	96.05	8.00e-178	615.00
IUUC-Tgu-117494	Taeniopygia guttata	80.75	3.00e-159	553.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence