iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-028305

Ensembl Protein ID

ENSDARP00000013943.8

UniProt Accession

F1R4B9; F1R4B9_DANRE

Genbank Protein ID

ENSDARP00000013943

Protein Name

Interferon-induced with helicase C domain 1

Genbank Nucleotide ID

AL954669

Gene Name

ifih1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000018553.10	ENSDART00000003913.9	ENSDARP00000013943.8

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/CARD	8.10e-18	65.7	10	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/CARD

   S: 2    deeyrlllstlqdrvrklLdvtdvldkylseflleeekelilaaaetkgnmqaaelLLktL...vqkegWfrefl 73
           d+e r  l +++dr+++l++v++ ld  l  fl    ke i a ++ +gn +a+ lL++ +     ++gW r+++
   Q: 10   DTETRHILDCFRDRLKRLIQVEPLLD--LLDFLEPDKKERIKAKVASEGNINAVSLLINEImraELQQGWSRTLV 82
           799***********************..666******************************999999*****986 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MDPNMSSDQD TETRHILDCF RDRLKRLIQV EPLLDLLDFL EPDKKERIKA KVASEGNINA 60
VSLLINEIMR AELQQGWSRT LVTALETVGC GHAARYVRNR PPEPDEEAEH DSCVRLIDLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCGCAGGTC TGAGCGTGCA GTTGGGTCTC CGGGCCTGCA GCTTCCCCTT ACTCCATTAT 60
TCTGCTTATA CATAATGGCA TGTCTTCATT TGAATACACT ATATTTCATT TGTAAATAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome

Interpro

IPR031964--CARD_dom
IPR011029--DEATH-like_dom
IPR006935--Helicase/UvrB_N
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR021673--RLR_CTR

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS51789--RLR_CTR

Pfam

PF16739--CARD_2
PF00271--Helicase_C
PF04851--ResIII
PF11648--RIG-I_C-RD

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0016817--F:hydrolase activity, acting on acid anhydrides
GO:0046982--F:protein heterodimerization activity
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001336	Ailuropoda melanoleuca	54.33	0.00e+00	755.00
IUUC-Apl-003900	Anas platyrhynchos	48.67	0.00e+00	889.00
IUUC-Aca-005329	Anolis carolinensis	46.86	0.00e+00	776.00
IUUC-Ame-011305	Astyanax mexicanus	79.12	0.00e+00	1135.00
IUUC-Bta-012361	Bos taurus	48.34	0.00e+00	848.00
IUUC-Cel-018230	Caenorhabditis elegans	26.48	1.00e-56	215.00
IUUC-Cja-018760	Callithrix jacchus	54.50	0.00e+00	715.00
IUUC-Cfa-020321	Canis familiaris	47.08	0.00e+00	846.00
IUUC-Cpo-022450	Cavia porcellus	47.08	0.00e+00	839.00
IUUC-Cre-022916	Chlamydomonas reinhardtii	29.57	1.00e-08	55.80
IUUC-Csa-024194	Chlorocebus sabaeus	48.39	0.00e+00	815.00
IUUC-Cho-024364	Choloepus hoffmanni	46.93	3.00e-149	523.00
IUUC-Cin-025792	Ciona intestinalis	30.23	5.00e-76	279.00
IUUC-Cgl-026385	Colletotrichum gloeosporioides	25.09	2.00e-22	102.00
IUUC-Dno-029831	Dasypus novemcinctus	46.82	0.00e+00	867.00
IUUC-Dor-030410	Dipodomys ordii	54.27	4.00e-179	622.00
IUUC-Ete-032950	Echinops telfairi	49.54	2.00e-111	397.00
IUUC-Eca-034279	Equus caballus	47.84	0.00e+00	853.00
IUUC-Eeu-034678	Erinaceus europaeus	45.91	0.00e+00	835.00
IUUC-Fca-035618	Felis catus	51.75	7.00e-158	550.00
IUUC-Fal-037106	Ficedula albicollis	56.16	0.00e+00	771.00
IUUC-Fso-038398	Fusarium solani	25.62	3.00e-27	118.00
IUUC-Gmo-038598	Gadus morhua	58.24	0.00e+00	800.00
IUUC-Gga-040467	Gallus gallus	47.83	0.00e+00	880.00
IUUC-Gac-042316	Gasterosteus aculeatus	54.79	0.00e+00	1040.00
IUUC-Ggo-045461	Gorilla gorilla	47.20	0.00e+00	806.00
IUUC-Hsa-045771	Homo sapiens	47.14	0.00e+00	804.00
IUUC-Itr-048762	Ictidomys tridecemlineatus	47.76	0.00e+00	837.00
IUUC-Lch-049913	Latimeria chalumnae	58.64	0.00e+00	788.00
IUUC-Loc-052768	Lepisosteus oculatus	58.60	0.00e+00	1112.00
IUUC-Laf-053933	Loxodonta africana	48.11	0.00e+00	838.00
IUUC-Mcc-054695	Macaca mulatta	48.53	0.00e+00	813.00
IUUC-Meu-056829	Macropus eugenii	49.03	0.00e+00	675.00
IUUC-Mga-059205	Meleagris gallopavo	48.73	0.00e+00	885.00
IUUC-Mvi-060497	Microbotryum violaceum	39.26	6.00e-20	94.00
IUUC-Mmr-060703	Microcebus murinus	53.57	0.00e+00	724.00
IUUC-Mdo-063079	Monodelphis domestica	46.04	0.00e+00	870.00
IUUC-Mmu-064066	Mus musculus	47.06	0.00e+00	874.00
IUUC-Mpu-066261	Mustela putorius furo	53.43	0.00e+00	753.00
IUUC-Mlu-068196	Myotis lucifugus	53.99	0.00e+00	749.00
IUUC-Nfi-068405	Neosartorya fischeri	29.70	1.00e-11	66.60
IUUC-Nle-069479	Nomascus leucogenys	48.37	0.00e+00	807.00
IUUC-Opr-070717	Ochotona princeps	48.69	3.00e-138	486.00
IUUC-Ont-071702	Oreochromis niloticus	54.93	0.00e+00	1019.00
IUUC-Oan-073639	Ornithorhynchus anatinus	48.70	0.00e+00	785.00
IUUC-Ocu-074521	Oryctolagus cuniculus	54.72	0.00e+00	753.00
IUUC-Ola-086351	Oryzias latipes	54.16	0.00e+00	985.00
IUUC-Oga-088539	Otolemur garnettii	47.22	0.00e+00	816.00
IUUC-Oar-090186	Ovis aries	47.25	0.00e+00	832.00
IUUC-Ptr-090575	Pan troglodytes	48.71	0.00e+00	806.00
IUUC-Pan-092371	Papio anubis	48.49	0.00e+00	816.00
IUUC-Psi-093072	Pelodiscus sinensis	48.14	0.00e+00	900.00
IUUC-Pma-094345	Petromyzon marinus	43.50	5.00e-89	321.00
IUUC-Pfo-096401	Poecilia formosa	53.97	0.00e+00	979.00
IUUC-Pab-097623	Pongo abelii	47.17	0.00e+00	801.00
IUUC-Pca-100993	Procavia capensis	42.84	0.00e+00	669.00
IUUC-Pva-102227	Pteropus vampyrus	44.61	0.00e+00	772.00
IUUC-Pgr-103529	Puccinia graminis	27.26	3.00e-26	114.00
IUUC-Rno-105198	Rattus norvegicus	47.47	0.00e+00	850.00
IUUC-Sha-107622	Sarcophilus harrisii	55.31	0.00e+00	770.00
IUUC-Ssl-108450	Sclerotinia sclerotiorum	30.00	1.70e-02	36.60
IUUC-Sar-113625	Sorex araneus	52.58	7.00e-92	332.00
IUUC-Ssc-116120	Sus scrofa	34.34	1.00e-81	298.00
IUUC-Tgu-117486	Taeniopygia guttata	54.31	0.00e+00	751.00
IUUC-Tru-118445	Takifugu rubripes	54.79	0.00e+00	1031.00
IUUC-Tsy-119512	Tarsius syrichta	53.94	0.00e+00	688.00
IUUC-Tni-120711	Tetraodon nigroviridis	53.95	0.00e+00	1043.00
IUUC-Tre-122194	Trichoderma reesei	24.67	3.00e-19	91.70
IUUC-Tbe-127644	Tupaia belangeri	43.42	4.00e-130	459.00
IUUC-Ttr-128989	Tursiops truncatus	43.97	0.00e+00	778.00
IUUC-Vpa-130587	Vicugna pacos	44.34	0.00e+00	665.00
IUUC-Xtr-132127	Xenopus tropicalis	45.57	0.00e+00	838.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence