iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001664

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01179021

Gene Name

WDR38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000016530.1	ENSAMET00000018174.1	ENSAMEP00000017462.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-47	156.3	190	222
UBD/Beta-Prp	1.00e-75	254.8	16	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           gH++ ++cl++  s +ll+sGs+D+ti++W ++t
   Q: 190  GHSGNISCLCYsaS-GLLASGSWDKTIHIWKPST 222
           8**********754.***************9766 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgh 93
           ++g h + +++ +fspd++ l+t+s+dg++  w++++g ll++lsgh ++v+ ++fspdg +++t+s D ti++wd+   kc+h+lkgh
   Q: 16   FFGRHHGEVNSSAFSPDGRRLLTASEDGCVYGWETQSGRLLWRLSGHAGPVKFCRFSPDGRLFATTSCDCTIRLWDVAETKCLHVLKGH 104
           67888999999****************************************************************************** PP
   S: 94   edsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           ++sv ++sfsp+++ l+sG++d+ +++w++++gq l+  l  h++++++  + p ++ l++Gs D+t+ +Wdl++g+ 
   Q: 105  QRSVETVSFSPDSKQLASGGWDKRVKLWEVQSGQMLR-HLGDHRDSIQSSDFAPGSDSLATGSWDSTICIWDLRMGTP 181
           *************************************.****************99*******************985 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MNSGAPGTLA VGRVKFFGRH HGEVNSSAFS PDGRRLLTAS EDGCVYGWET QSGRLLWRLS 60
GHAGPVKFCR FSPDGRLFAT TSCDCTIRLW DVAETKCLHV LKGHQRSVET VSFSPDSKQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACAGCG GGGCCCCAGG GACGCTGGCC GTGGGGAGAG TGAAATTCTT CGGCCGGCAC 60
CACGGGGAGG TGAGTCCAGT CGGGCTCTGC CGACTCTAGG CTCCTGGCTT TGGGTCTAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0002244--P:hematopoietic progenitor cell differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-010858	Astyanax mexicanus	46.69	3.00e-74	271.00
IUUC-Bta-012352	Bos taurus	86.82	7.00e-151	526.00
IUUC-Bci-013991	Botrytis cinerea	43.14	4.00e-44	174.00
IUUC-Cja-019585	Callithrix jacchus	79.35	5.00e-146	509.00
IUUC-Cfa-020062	Canis familiaris	86.64	7.00e-142	496.00
IUUC-Csa-023528	Chlorocebus sabaeus	82.85	8.00e-152	529.00
IUUC-Cin-025426	Ciona intestinalis	33.76	3.00e-50	191.00
IUUC-Dre-027740	Danio rerio	50.00	3.00e-49	187.00
IUUC-Dno-030012	Dasypus novemcinctus	70.36	2.00e-130	458.00
IUUC-Dor-030536	Dipodomys ordii	66.32	2.00e-106	378.00
IUUC-Ete-032871	Echinops telfairi	76.72	8.00e-99	352.00
IUUC-Eca-033729	Equus caballus	88.18	4.00e-153	533.00
IUUC-Eeu-034740	Erinaceus europaeus	81.29	2.00e-144	504.00
IUUC-Fca-036514	Felis catus	89.81	2.00e-165	574.00
IUUC-Ggo-044793	Gorilla gorilla	79.35	2.00e-145	508.00
IUUC-Hsa-046414	Homo sapiens	81.99	4.00e-150	523.00
IUUC-Itr-048798	Ictidomys tridecemlineatus	77.63	2.00e-124	438.00
IUUC-Lch-049905	Latimeria chalumnae	50.87	3.00e-86	311.00
IUUC-Loc-052101	Lepisosteus oculatus	51.24	2.00e-81	295.00
IUUC-Laf-053443	Loxodonta africana	78.33	4.00e-137	480.00
IUUC-Mcc-055346	Macaca mulatta	82.85	2.00e-152	531.00
IUUC-Meu-056531	Macropus eugenii	63.09	4.00e-80	290.00
IUUC-Mmr-061721	Microcebus murinus	85.47	1.00e-148	518.00
IUUC-Mdo-062379	Monodelphis domestica	64.83	6.00e-110	390.00
IUUC-Mmu-064175	Mus musculus	76.95	5.00e-131	460.00
IUUC-Mpu-066361	Mustela putorius furo	92.57	1.00e-160	558.00
IUUC-Mlu-067300	Myotis lucifugus	65.78	3.00e-101	361.00
IUUC-Nle-070150	Nomascus leucogenys	82.83	6.00e-144	503.00
IUUC-Opr-071060	Ochotona princeps	70.82	4.00e-113	400.00
IUUC-Ocu-074101	Oryctolagus cuniculus	79.30	6.00e-144	503.00
IUUC-Oga-088479	Otolemur garnettii	81.36	3.00e-141	493.00
IUUC-Oar-089608	Ovis aries	86.39	7.00e-150	523.00
IUUC-Ptr-091521	Pan troglodytes	82.58	7.00e-152	529.00
IUUC-Pan-092092	Papio anubis	82.85	4.00e-152	530.00
IUUC-Pab-098454	Pongo abelii	82.26	2.00e-150	524.00
IUUC-Pca-100981	Procavia capensis	78.96	1.00e-143	502.00
IUUC-Pva-102491	Pteropus vampyrus	86.90	4.00e-155	540.00
IUUC-Rno-105417	Rattus norvegicus	77.98	1.00e-125	442.00
IUUC-Sha-107649	Sarcophilus harrisii	65.28	3.00e-110	391.00
IUUC-Sar-113110	Sorex araneus	66.55	2.00e-87	315.00
IUUC-Ssc-116197	Sus scrofa	85.94	3.00e-156	544.00
IUUC-Tbe-127734	Tupaia belangeri	80.61	5.00e-76	277.00
IUUC-Ttr-128709	Tursiops truncatus	81.79	3.00e-145	507.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence