iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000034928.16	ENSMUST00000125871.7	ENSMUSP00000118474.1
ENSMUSG00000034928.16	ENSMUST00000037422.15	ENSMUSP00000043974.9
ENSMUSG00000034928.16	ENSMUST00000126717.7	ENSMUSP00000116043.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	miRTarBase	microRNA	TRANSFAC
RepTar	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.90e-09	37.7	380	421

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C++df  ++ ++vlpC+H fha+C+ kw       + + +CP+Cr
   Q: 380  CVVCFSDFevRQLLRVLPCNHEFHAKCVDKW------LKANRTCPICR 421
           ********65333889***************......**********8 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MRPWTLAVTK WPPSAPVGHW RVSTRLSSSP GQLWGSLGHE GPLVSPPAQD ERLPSQQLLP 60
RPSNLSVEEH RASAPAGRSP RMLHPATQQS PFMVDLHEQV HQGPVPLSYT VTTVTTQGFP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCGAGCACT GGGGATGGGG GAGGCGACGA GCGGGGTCGT CGCCACTGAG AGGTTCCATT 60
GCGGGCGCAG GGGGAGGGCC GCGGCCGGCG GCTTGCGAGC CGCAGCCGGA GCCGGACCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002180	Ailuropoda melanoleuca	84.26	0.00e+00	639.00
IUUC-Atr-003121	Amborella trichopoda	41.18	6.00e-15	72.80
IUUC-Aca-004353	Anolis carolinensis	73.27	1.00e-152	532.00
IUUC-Aly-005825	Arabidopsis lyrata	40.00	8.00e-14	71.20
IUUC-Ath-007389	Arabidopsis thaliana	40.00	7.00e-14	71.20
IUUC-Bta-012954	Bos taurus	87.53	0.00e+00	672.00
IUUC-Bol-015622	Brassica oleracea	40.00	3.00e-13	69.30
IUUC-Bra-017837	Brassica rapa	40.00	6.00e-14	71.60
IUUC-Cja-019606	Callithrix jacchus	92.59	7.00e-166	576.00
IUUC-Cfa-020959	Canis familiaris	88.26	0.00e+00	684.00
IUUC-Cpo-022130	Cavia porcellus	88.19	0.00e+00	716.00
IUUC-Cre-022984	Chlamydomonas reinhardtii	32.63	9.00e-12	66.60
IUUC-Csa-024265	Chlorocebus sabaeus	89.15	0.00e+00	671.00
IUUC-Cin-025552	Ciona intestinalis	62.39	1.00e-36	145.00
IUUC-Dno-030071	Dasypus novemcinctus	87.44	0.00e+00	656.00
IUUC-Dor-030199	Dipodomys ordii	76.91	9.00e-168	583.00
IUUC-Dme-032187	Drosophila melanogaster	65.04	3.00e-44	174.00
IUUC-Eca-034105	Equus caballus	90.30	0.00e+00	665.00
IUUC-Fca-036360	Felis catus	89.38	0.00e+00	681.00
IUUC-Fal-037494	Ficedula albicollis	73.99	2.00e-160	558.00
IUUC-Gga-040521	Gallus gallus	74.16	1.00e-160	559.00
IUUC-Gac-041636	Gasterosteus aculeatus	63.80	7.00e-124	437.00
IUUC-Gma-043251	Glycine max	42.00	9.00e-16	77.80
IUUC-Ggo-044732	Gorilla gorilla	86.37	0.00e+00	642.00
IUUC-Hsa-046830	Homo sapiens	90.30	0.00e+00	685.00
IUUC-Itr-048694	Ictidomys tridecemlineatus	90.99	0.00e+00	661.00
IUUC-Lch-050227	Latimeria chalumnae	69.11	2.00e-146	512.00
IUUC-Laf-053419	Loxodonta africana	81.48	0.00e+00	651.00
IUUC-Mcc-054969	Macaca mulatta	93.75	1.00e-170	592.00
IUUC-Meu-056404	Macropus eugenii	78.95	5.00e-179	620.00
IUUC-Mdo-062309	Monodelphis domestica	85.09	6.00e-151	526.00
IUUC-Mac-065494	Musa acuminata	49.28	5.00e-15	75.50
IUUC-Mpu-066508	Mustela putorius furo	89.98	0.00e+00	661.00
IUUC-Mlu-068210	Myotis lucifugus	85.02	1.00e-173	602.00
IUUC-Nle-069124	Nomascus leucogenys	86.84	0.00e+00	649.00
IUUC-Opr-071167	Ochotona princeps	87.76	8.00e-153	533.00
IUUC-Ont-072090	Oreochromis niloticus	62.92	4.00e-117	414.00
IUUC-Ocu-074801	Oryctolagus cuniculus	70.65	1.00e-154	539.00
IUUC-Oba-075816	Oryza barthii	33.66	3.00e-15	77.00
IUUC-Ogl-077408	Oryza glaberrima	33.66	2.00e-15	77.00
IUUC-Ogu-078097	Oryza glumaepatula	36.70	5.00e-16	79.00
IUUC-Oin-079490	Oryza indica	33.66	2.00e-15	77.00
IUUC-Olo-080723	Oryza longistaminata	33.66	4.00e-15	76.60
IUUC-Ome-081876	Oryza meridionalis	32.67	6.00e-15	75.50
IUUC-Oni-082843	Oryza nivara	33.66	2.00e-15	77.00
IUUC-Opu-084138	Oryza punctata	35.64	2.00e-15	77.00
IUUC-Oru-085152	Oryza rufipogon	33.66	2.00e-15	77.00
IUUC-Osa-086098	Oryza sativa	33.66	2.00e-15	77.00
IUUC-Ola-086948	Oryzias latipes	64.41	2.00e-121	429.00
IUUC-Oga-087987	Otolemur garnettii	87.50	0.00e+00	683.00
IUUC-Oar-089245	Ovis aries	82.50	0.00e+00	647.00
IUUC-Ptr-091155	Pan troglodytes	89.84	0.00e+00	676.00
IUUC-Pan-092597	Papio anubis	89.84	0.00e+00	684.00
IUUC-Pfo-096747	Poecilia formosa	64.94	4.00e-121	427.00
IUUC-Pab-098133	Pongo abelii	83.48	1.00e-149	522.00
IUUC-Pop-099843	Populus trichocarpa	38.89	5.00e-16	78.60
IUUC-Pca-100961	Procavia capensis	85.42	0.00e+00	657.00
IUUC-Ppe-102055	Prunus persica	37.78	2.00e-15	76.60
IUUC-Pva-102987	Pteropus vampyrus	83.80	3.00e-178	617.00
IUUC-Rno-105434	Rattus norvegicus	98.86	2.00e-174	605.00
IUUC-Sha-107023	Sarcophilus harrisii	73.36	3.00e-165	574.00
IUUC-Sit-110142	Setaria italica	33.93	3.00e-15	76.60
IUUC-Sly-111904	Solanum lycopersicum	34.29	6.00e-15	76.30
IUUC-Stu-112093	Solanum tuberosum	41.67	4.00e-15	75.10
IUUC-Sar-113463	Sorex araneus	80.82	1.00e-129	455.00
IUUC-Sbi-114733	Sorghum bicolor	33.63	2.00e-15	77.00
IUUC-Ssc-115578	Sus scrofa	89.38	0.00e+00	684.00
IUUC-Tgu-117430	Taeniopygia guttata	74.32	6.00e-155	540.00
IUUC-Tru-117715	Takifugu rubripes	65.17	2.00e-126	445.00
IUUC-Tni-119691	Tetraodon nigroviridis	65.17	4.00e-127	448.00
IUUC-Tca-121858	Theobroma cacao	42.22	5.00e-16	79.00
IUUC-Tbe-127519	Tupaia belangeri	84.66	2.00e-138	484.00
IUUC-Ttr-128179	Tursiops truncatus	89.15	0.00e+00	684.00
IUUC-Xtr-132852	Xenopus tropicalis	69.14	3.00e-138	485.00
IUUC-Xma-133465	Xiphophorus maculatus	62.92	7.00e-118	417.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence