iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000034757.15	ENSMUST00000036376.12	ENSMUSP00000047600.6
ENSMUSG00000034757.15	ENSMUST00000100387.10	ENSMUSP00000097956.4

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
miRTarBase	microRNA	TRANSFAC	RepTar
RAID2
Post-translational Modifications (PTMs)
CPLM	mUbiSiDa
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	2.80e-07	31.4	214	283

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 3    vtvksldgs.eltlkvnpsdtVaeLKekiekklgip.pe.qqrLiykGkiL.eddktLadyglkdgstihllekks 74
           v++k l+++ el +   p dtV++LK      + +p  e q++Liy+G++L ++ +tL++++++++++ih+ ++ +
   Q: 214  VRLKFLNDTeELAVA-RPEDTVGTLKS-----KYFPgQEsQMKLIYQGRLLqDPARTLSSLNITNNCVIHCHRSPP 283
           667777777677777.99*********.....445543349**********999*****************98876 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

XSWMLTASEK SRKRSDPGQN PELPAPPLTP TERELQRLSW RSQNIYPGFV SVDPVSSQAM 60
ELSDVTLIEG VGNEVMVVAG VVALTLALVL AWLSTYVADS GNNQLLGTIV SAGDTSVLHL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACTTCCTGT CCTGGATGTT AACAGCTTCC GAGAAAAGCC GGAAGAGATC GGACCCTGGA 60
CAGAATCCTG AGTTGCCAGC CCCTCCCCTG ACCCCTACGG AAAGAGAACT ACAAAGACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001840	Ailuropoda melanoleuca	81.94	1.00e-99	355.00
IUUC-Aca-005209	Anolis carolinensis	56.29	7.00e-80	290.00
IUUC-Ame-010717	Astyanax mexicanus	48.87	6.00e-49	187.00
IUUC-Bta-013468	Bos taurus	79.38	3.00e-100	358.00
IUUC-Cja-019294	Callithrix jacchus	85.16	1.00e-112	399.00
IUUC-Cfa-021109	Canis familiaris	80.83	3.00e-104	371.00
IUUC-Cpo-022549	Cavia porcellus	68.59	9.00e-90	323.00
IUUC-Csa-023126	Chlorocebus sabaeus	80.40	1.00e-103	369.00
IUUC-Cin-025480	Ciona intestinalis	27.57	7.00e-17	80.90
IUUC-Csv-025923	Ciona savignyi	26.11	4.00e-20	91.70
IUUC-Dre-028755	Danio rerio	47.08	1.00e-47	183.00
IUUC-Dno-029940	Dasypus novemcinctus	80.31	3.00e-101	361.00
IUUC-Dor-030456	Dipodomys ordii	82.06	2.00e-123	435.00
IUUC-Ete-032609	Echinops telfairi	76.08	9.00e-86	309.00
IUUC-Eca-034423	Equus caballus	80.51	9.00e-102	363.00
IUUC-Eeu-035284	Erinaceus europaeus	78.48	3.00e-93	334.00
IUUC-Fca-035553	Felis catus	82.12	7.00e-97	347.00
IUUC-Gmo-038738	Gadus morhua	65.33	5.00e-42	164.00
IUUC-Gga-040627	Gallus gallus	50.00	9.00e-33	133.00
IUUC-Gac-042150	Gasterosteus aculeatus	47.54	6.00e-50	191.00
IUUC-Ggo-044895	Gorilla gorilla	81.23	8.00e-115	406.00
IUUC-Hsa-046457	Homo sapiens	79.94	1.00e-111	395.00
IUUC-Itr-048219	Ictidomys tridecemlineatus	81.50	4.00e-106	377.00
IUUC-Lch-050592	Latimeria chalumnae	49.20	6.00e-63	234.00
IUUC-Loc-052937	Lepisosteus oculatus	52.16	1.00e-65	243.00
IUUC-Laf-053558	Loxodonta africana	79.81	5.00e-112	397.00
IUUC-Mcc-055774	Macaca mulatta	79.49	3.00e-110	391.00
IUUC-Meu-056781	Macropus eugenii	72.43	1.00e-81	295.00
IUUC-Mga-059568	Meleagris gallopavo	52.45	1.00e-33	135.00
IUUC-Mmr-061734	Microcebus murinus	76.08	3.00e-91	328.00
IUUC-Mdo-062690	Monodelphis domestica	72.35	4.00e-83	301.00
IUUC-Mpu-066140	Mustela putorius furo	81.13	1.00e-110	392.00
IUUC-Mlu-068075	Myotis lucifugus	80.32	2.00e-113	402.00
IUUC-Nle-069580	Nomascus leucogenys	79.00	1.00e-102	366.00
IUUC-Ont-071769	Oreochromis niloticus	59.62	1.00e-41	163.00
IUUC-Oan-072866	Ornithorhynchus anatinus	49.28	3.00e-50	191.00
IUUC-Ocu-074249	Oryctolagus cuniculus	77.29	4.00e-91	328.00
IUUC-Ola-086570	Oryzias latipes	61.68	2.00e-42	166.00
IUUC-Oga-088907	Otolemur garnettii	77.40	8.00e-96	343.00
IUUC-Oar-089602	Ovis aries	75.91	4.00e-94	338.00
IUUC-Ptr-091483	Pan troglodytes	79.94	1.00e-111	395.00
IUUC-Pan-092087	Papio anubis	79.49	7.00e-107	380.00
IUUC-Psi-093556	Pelodiscus sinensis	58.10	5.00e-76	277.00
IUUC-Pma-094352	Petromyzon marinus	32.94	7.00e-35	140.00
IUUC-Pfo-097094	Poecilia formosa	61.68	8.00e-45	174.00
IUUC-Pab-098314	Pongo abelii	79.31	2.00e-103	369.00
IUUC-Pca-100545	Procavia capensis	76.16	3.00e-98	351.00
IUUC-Rno-104920	Rattus norvegicus	93.06	1.00e-148	519.00
IUUC-Sha-107335	Sarcophilus harrisii	71.06	2.00e-83	302.00
IUUC-Sar-113732	Sorex araneus	73.83	9.00e-77	279.00
IUUC-Tru-118017	Takifugu rubripes	45.77	3.00e-44	172.00
IUUC-Tni-119954	Tetraodon nigroviridis	44.20	6.00e-47	181.00
IUUC-Tbe-127521	Tupaia belangeri	81.06	4.00e-102	364.00
IUUC-Ttr-128289	Tursiops truncatus	79.47	5.00e-99	353.00
IUUC-Vpa-130574	Vicugna pacos	72.52	2.00e-79	289.00
IUUC-Xtr-131875	Xenopus tropicalis	44.91	7.00e-65	240.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence