iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggo-045483

Ensembl Protein ID

ENSGGOP00000016758.2

UniProt Accession

G3RLU7; G3RLU7_GORGO

Protein Name

Uncharacterized protein

Gene Name

PATZ1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGGOG00000017171.2	ENSGGOT00000017229.2	ENSGGOP00000016758.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	1.20e-13	51.6	41	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 1    aDvilvvggeeffahkivLaasSsvFyalflmelees......................ksklmveikdvqpevfrallkFlYtgkl 65
           +Dv+l vg+e f+ah++vLaa+S++F++ f+ +l ++                        + + e++ ++ +vf ++l+F Yt+++
   Q: 41   CDVLLRVGDESFPAHRAVLAACSEYFESVFSAQLGDGgaadggpadvggataapgggagG-SRELEMHTISSKVFGDILDFAYTSRI 126
           8**********************************999********************54.8899999****************997 PP

Organism

Gorilla gorilla

Protein Sequence
(Fasta)

MERVNDASCG PSGCYTYQVS RHSTEMLHNL NQQRKNGGRF CDVLLRVGDE SFPAHRAVLA 60
ACSEYFESVF SAQLGDGGAA DGGPADVGGA TAAPGGGAGG SRELEMHTIS SKVFGDILDF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCCACCGCC CCCGTGCGCG CCCCGCCGCC GCCGCCTTCG CCTTTTGTTT CCTCCGCTCC 60
GGCGCCCCCG CCCCGGCTCG CGCTTTGCAG GGGACGCAGC GCGCGCCCCC AGCGGGCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR000637--HMGI/Y_DNA-bd_CS
IPR004039--Rubredoxin-type_fold
IPR011333--SKP1/BTB/POZ
IPR013087--Znf_C2H2_type
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50097--BTB
PS00354--HMGI_Y
PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF00651--BTB

SMART

SM00225--BTB
SM00355--ZnF_C2H2

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0003682--F:chromatin binding
GO:0046872--F:metal ion binding
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077--F:transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0008584--P:male gonad development
GO:0007283--P:spermatogenesis
GO:0030217--P:T cell differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001393	Ailuropoda melanoleuca	99.27	0.00e+00	1274.00
IUUC-Ame-010861	Astyanax mexicanus	58.56	0.00e+00	710.00
IUUC-Bta-012647	Bos taurus	99.27	0.00e+00	1273.00
IUUC-Cja-019987	Callithrix jacchus	99.27	0.00e+00	1248.00
IUUC-Cfa-020091	Canis familiaris	99.42	0.00e+00	1274.00
IUUC-Cpo-021731	Cavia porcellus	98.25	0.00e+00	1258.00
IUUC-Csa-023323	Chlorocebus sabaeus	96.76	0.00e+00	946.00
IUUC-Cho-024339	Choloepus hoffmanni	97.06	1.00e-104	374.00
IUUC-Dre-028776	Danio rerio	54.73	0.00e+00	652.00
IUUC-Dno-028988	Dasypus novemcinctus	98.71	0.00e+00	1171.00
IUUC-Eca-034224	Equus caballus	92.72	0.00e+00	1167.00
IUUC-Fca-035834	Felis catus	92.87	0.00e+00	1161.00
IUUC-Gmo-038564	Gadus morhua	54.67	0.00e+00	671.00
IUUC-Gga-040923	Gallus gallus	88.35	0.00e+00	1147.00
IUUC-Gac-042115	Gasterosteus aculeatus	56.35	0.00e+00	733.00
IUUC-Hsa-045831	Homo sapiens	99.85	0.00e+00	1260.00
IUUC-Itr-048966	Ictidomys tridecemlineatus	99.27	0.00e+00	1276.00
IUUC-Lch-050298	Latimeria chalumnae	70.55	0.00e+00	903.00
IUUC-Laf-053714	Loxodonta africana	98.69	0.00e+00	1278.00
IUUC-Mcc-055844	Macaca mulatta	82.73	0.00e+00	755.00
IUUC-Mmr-061004	Microcebus murinus	96.38	0.00e+00	1226.00
IUUC-Mdo-061816	Monodelphis domestica	83.87	0.00e+00	974.00
IUUC-Mmu-063774	Mus musculus	99.13	0.00e+00	1273.00
IUUC-Mpu-066238	Mustela putorius furo	96.56	0.00e+00	939.00
IUUC-Mlu-068149	Myotis lucifugus	99.13	0.00e+00	1273.00
IUUC-Opr-071017	Ochotona princeps	88.56	0.00e+00	754.00
IUUC-Ont-072352	Oreochromis niloticus	55.17	0.00e+00	705.00
IUUC-Oan-073423	Ornithorhynchus anatinus	93.32	0.00e+00	1210.00
IUUC-Ocu-074291	Oryctolagus cuniculus	96.18	0.00e+00	941.00
IUUC-Oga-088646	Otolemur garnettii	99.42	0.00e+00	1270.00
IUUC-Oar-089847	Ovis aries	88.79	0.00e+00	1095.00
IUUC-Ptr-091669	Pan troglodytes	100.00	0.00e+00	1287.00
IUUC-Pfo-097307	Poecilia formosa	53.18	0.00e+00	657.00
IUUC-Pab-097693	Pongo abelii	99.71	0.00e+00	1284.00
IUUC-Pca-100274	Procavia capensis	83.50	2.00e-143	503.00
IUUC-Pva-102261	Pteropus vampyrus	99.56	0.00e+00	1274.00
IUUC-Rno-105339	Rattus norvegicus	92.58	0.00e+00	1157.00
IUUC-Ssc-116429	Sus scrofa	92.14	0.00e+00	1151.00
IUUC-Tgu-116916	Taeniopygia guttata	82.59	0.00e+00	974.00
IUUC-Tru-117811	Takifugu rubripes	57.68	0.00e+00	751.00
IUUC-Tni-120697	Tetraodon nigroviridis	52.78	0.00e+00	643.00
IUUC-Ttr-128276	Tursiops truncatus	99.27	0.00e+00	1273.00
IUUC-Xtr-131778	Xenopus tropicalis	71.45	0.00e+00	891.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence