iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Yli-134553

Ensembl Protein ID

CAG80042

UniProt Accession

Q6C4H1; EIF3F_YARLI

Genbank Protein ID

CAG80042.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

CR382131

Gene Name

YALI0E26851g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YALI0_E26851g	CAG80042	CAG80042

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	36.33	2.00e-38	157.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Yarrowia lipolytica

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MSETLQISRV AGTNGAPTHV TVTAQALFQI LDHALRREEE QSKVIGTLVG IRSEDGSEVE 60
VRNAYAVPHS ESEQEMTIDL EYNPTMLALH RKAFPKEVIV GWYATSSELN TFSGLIHDYY 120

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Nucleotide Sequence
(Fasta)

ATGTCGGAAA CTCTTCAGAT CAGCAGAGTC GCAGGCACCA ACGGCGCCCC TACACACGTG 60
ACCGTCACCG CCCAGGCTCT TTTCCAGATC CTCGACCATG CTCTCAGACG CGAGGAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0003743--F:translation initiation factor activity
GO:0031369--F:translation initiation factor binding
GO:0006413--P:translational initiation

KEGG

yli:YALI0E26851g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	30.69	3.00e-28	117.00
IUUC-Aml-001527	Ailuropoda melanoleuca	36.33	1.00e-43	168.00
IUUC-Atr-002686	Amborella trichopoda	33.83	2.00e-28	117.00
IUUC-Apl-003977	Anas platyrhynchos	34.78	1.00e-37	147.00
IUUC-Aca-004335	Anolis carolinensis	35.58	3.00e-44	169.00
IUUC-Aly-005945	Arabidopsis lyrata	31.58	8.00e-29	118.00
IUUC-Ath-007045	Arabidopsis thaliana	31.95	2.00e-28	117.00
IUUC-Acl-008365	Aspergillus clavatus	47.70	3.00e-73	266.00
IUUC-Afl-008742	Aspergillus flavus	45.91	1.00e-66	244.00
IUUC-Afu-009030	Aspergillus fumigatus	46.26	4.00e-72	262.00
IUUC-Ani-009212	Aspergillus nidulans	47.33	2.00e-73	266.00
IUUC-Ang-009712	Aspergillus niger	48.06	3.00e-73	266.00
IUUC-Aor-009885	Aspergillus oryzae	45.91	5.00e-71	259.00
IUUC-Ate-010315	Aspergillus terreus	47.33	3.00e-67	246.00
IUUC-Ame-010801	Astyanax mexicanus	45.78	2.00e-16	77.40
IUUC-Bgr-011982	Blumeria graminis	43.31	2.00e-68	250.00
IUUC-Bta-012804	Bos taurus	36.33	9.00e-44	168.00
IUUC-Bci-013891	Botrytis cinerea	43.31	1.00e-64	237.00
IUUC-Bdi-014328	Brachypodium distachyon	30.71	6.00e-33	132.00
IUUC-Bol-015446	Brassica oleracea	32.33	3.00e-30	123.00
IUUC-Bra-016862	Brassica rapa	32.33	4.00e-30	122.00
IUUC-Cel-018171	Caenorhabditis elegans	30.38	1.00e-30	124.00
IUUC-Cja-019335	Callithrix jacchus	36.33	1.00e-43	168.00
IUUC-Cfa-020138	Canis familiaris	36.33	6.00e-44	169.00
IUUC-Cpo-022109	Cavia porcellus	35.53	1.00e-37	147.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	32.39	2.00e-37	146.00
IUUC-Csa-023994	Chlorocebus sabaeus	36.33	9.00e-44	168.00
IUUC-Cho-024351	Choloepus hoffmanni	27.34	1.00e-21	95.50
IUUC-Cin-025801	Ciona intestinalis	33.21	4.00e-41	159.00
IUUC-Csv-025805	Ciona savignyi	33.09	2.00e-41	160.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	41.55	3.00e-64	236.00
IUUC-Cne-026868	Cryptococcus neoformans	31.79	2.00e-30	124.00
IUUC-Cme-027328	Cyanidioschyzon merolae	23.29	6.00e-15	72.80
IUUC-Dre-028085	Danio rerio	38.32	1.00e-48	184.00
IUUC-Dno-030099	Dasypus novemcinctus	36.33	2.00e-43	167.00
IUUC-Dor-030324	Dipodomys ordii	31.46	1.00e-32	131.00
IUUC-Dse-031314	Dothistroma septosporum	49.12	1.00e-78	284.00
IUUC-Dme-031926	Drosophila melanogaster	32.85	9.00e-36	141.00
IUUC-Ete-032569	Echinops telfairi	32.58	4.00e-35	139.00
IUUC-Eca-033502	Equus caballus	36.33	2.00e-42	164.00
IUUC-Eeu-034883	Erinaceus europaeus	28.27	2.00e-13	66.60
IUUC-Fca-035873	Felis catus	36.33	8.00e-44	168.00
IUUC-Fal-036921	Ficedula albicollis	35.96	3.00e-44	169.00
IUUC-Fox-037765	Fusarium oxysporum	42.46	9.00e-60	221.00
IUUC-Fso-038240	Fusarium solani	42.11	5.00e-61	225.00
IUUC-Gmo-038864	Gadus morhua	37.59	1.00e-48	184.00
IUUC-Ggr-039862	Gaeumannomyces graminis	42.62	2.00e-64	237.00
IUUC-Gga-040952	Gallus gallus	35.96	5.00e-44	169.00
IUUC-Gac-041677	Gasterosteus aculeatus	35.77	3.00e-46	176.00
IUUC-Gma-043061	Glycine max	32.09	5.00e-25	105.00
IUUC-Ggo-045591	Gorilla gorilla	36.33	9.00e-44	168.00
IUUC-Hsa-046860	Homo sapiens	36.33	9.00e-44	168.00
IUUC-Itr-048211	Ictidomys tridecemlineatus	35.96	2.00e-43	167.00
IUUC-Lch-049410	Latimeria chalumnae	32.08	2.00e-24	103.00
IUUC-Lpe-051102	Leersia perrieri	31.84	2.00e-30	124.00
IUUC-Loc-052016	Lepisosteus oculatus	32.50	3.00e-32	130.00
IUUC-Lma-053157	Leptosphaeria maculans	46.98	5.00e-76	275.00
IUUC-Laf-054568	Loxodonta africana	36.33	1.00e-43	168.00
IUUC-Mcc-054613	Macaca mulatta	36.33	9.00e-44	168.00
IUUC-Meu-056832	Macropus eugenii	26.39	3.00e-16	76.30
IUUC-Mor-057104	Magnaporthe oryzae	41.61	7.00e-66	242.00
IUUC-Mtr-058445	Medicago truncatula	31.95	3.00e-35	139.00
IUUC-Mla-059038	Melampsora laricipopulina	35.46	1.00e-44	171.00
IUUC-Mga-059548	Meleagris gallopavo	35.15	1.00e-39	154.00
IUUC-Mvi-060520	Microbotryum violaceum	33.22	6.00e-32	129.00
IUUC-Mdo-062376	Monodelphis domestica	36.33	4.00e-44	169.00
IUUC-Mmu-063254	Mus musculus	36.33	1.00e-43	168.00
IUUC-Mac-065635	Musa acuminata	29.45	4.00e-26	109.00
IUUC-Mpu-066314	Mustela putorius furo	36.33	9.00e-44	168.00
IUUC-Mlu-067512	Myotis lucifugus	36.70	2.00e-43	167.00
IUUC-Nfi-068262	Neosartorya fischeri	46.26	1.00e-71	260.00
IUUC-Ncr-068872	Neurospora crassa	42.07	3.00e-60	223.00
IUUC-Nle-070118	Nomascus leucogenys	36.33	1.00e-43	168.00
IUUC-Opr-071228	Ochotona princeps	35.56	2.00e-39	153.00
IUUC-Ont-072600	Oreochromis niloticus	36.13	8.00e-47	178.00
IUUC-Oan-073584	Ornithorhynchus anatinus	35.15	2.00e-39	153.00
IUUC-Ocu-074542	Oryctolagus cuniculus	36.33	4.00e-44	169.00
IUUC-Oba-075923	Oryza barthii	31.77	1.00e-30	124.00
IUUC-Obr-076313	Oryza brachyantha	32.58	5.00e-31	125.00
IUUC-Ogl-076932	Oryza glaberrima	31.77	1.00e-30	124.00
IUUC-Ogu-078152	Oryza glumaepatula	31.77	1.00e-30	124.00
IUUC-Oin-079528	Oryza indica	31.77	1.00e-30	124.00
IUUC-Olo-080401	Oryza longistaminata	31.77	1.00e-30	124.00
IUUC-Ome-081553	Oryza meridionalis	31.77	8.00e-31	125.00
IUUC-Oni-082090	Oryza nivara	31.87	1.00e-30	124.00
IUUC-Opu-083583	Oryza punctata	31.84	5.00e-30	122.00
IUUC-Oru-084492	Oryza rufipogon	31.77	1.00e-30	124.00
IUUC-Osa-085383	Oryza sativa	31.77	1.00e-30	124.00
IUUC-Ola-086835	Oryzias latipes	36.13	2.00e-46	177.00
IUUC-Olu-087716	Ostreococcus lucimarinus	31.16	6.00e-27	112.00
IUUC-Oga-088886	Otolemur garnettii	36.33	6.00e-44	169.00
IUUC-Oar-090079	Ovis aries	36.33	7.00e-44	168.00
IUUC-Ptr-091457	Pan troglodytes	36.33	9.00e-44	168.00
IUUC-Pan-092317	Papio anubis	32.46	1.00e-22	97.80
IUUC-Psi-093129	Pelodiscus sinensis	34.73	1.00e-38	151.00
IUUC-Pma-094488	Petromyzon marinus	37.83	1.00e-47	181.00
IUUC-Pno-095049	Phaeosphaeria nodorum	47.69	3.00e-77	279.00
IUUC-Ppa-095341	Physcomitrella patens	35.38	1.00e-42	164.00
IUUC-Pfo-096286	Poecilia formosa	36.13	1.00e-47	180.00
IUUC-Pab-097765	Pongo abelii	36.33	9.00e-44	168.00
IUUC-Pop-099131	Populus trichocarpa	32.46	5.00e-32	129.00
IUUC-Pca-100524	Procavia capensis	29.71	5.00e-22	95.50
IUUC-Ppe-101934	Prunus persica	31.95	6.00e-34	135.00
IUUC-Pva-102577	Pteropus vampyrus	36.70	3.00e-44	170.00
IUUC-Pgr-103521	Puccinia graminis	34.39	1.00e-41	160.00
IUUC-Pte-104304	Pyrenophora teres	47.69	4.00e-77	279.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	47.33	7.00e-77	278.00
IUUC-Rno-105717	Rattus norvegicus	36.33	8.00e-44	168.00
IUUC-Sha-107190	Sarcophilus harrisii	36.33	3.00e-44	170.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	41.67	4.00e-63	232.00
IUUC-Spo-108355	Schizosaccharomyces pombe	41.58	1.00e-63	234.00
IUUC-Smo-109374	Selaginella moellendorffii	36.20	3.00e-43	166.00
IUUC-Sit-110119	Setaria italica	32.47	7.00e-32	128.00
IUUC-Sly-111570	Solanum lycopersicum	28.40	6.00e-25	105.00
IUUC-Stu-112308	Solanum tuberosum	30.00	5.00e-29	119.00
IUUC-Sar-113515	Sorex araneus	29.59	2.00e-06	43.50
IUUC-Sbi-114605	Sorghum bicolor	31.73	6.00e-31	126.00
IUUC-Sre-114906	Sporisorium reilianum	44.60	8.00e-57	211.00
IUUC-Tgu-117087	Taeniopygia guttata	34.02	3.00e-38	149.00
IUUC-Tru-117700	Takifugu rubripes	35.77	6.00e-46	175.00
IUUC-Tni-120470	Tetraodon nigroviridis	36.86	2.00e-47	180.00
IUUC-Tca-121109	Theobroma cacao	31.67	1.00e-26	111.00
IUUC-Tre-122095	Trichoderma reesei	43.06	2.00e-60	223.00
IUUC-Tvi-122580	Trichoderma virens	43.06	1.00e-60	224.00
IUUC-Tae-125129	Triticum aestivum	32.84	4.00e-32	129.00
IUUC-Tur-126658	Triticum urartu	28.47	8.00e-25	105.00
IUUC-Tme-127043	Tuber melanosporum	50.53	4.00e-82	295.00
IUUC-Tbe-127927	Tupaia belangeri	36.33	8.00e-44	168.00
IUUC-Ttr-129231	Tursiops truncatus	36.33	5.00e-44	169.00
IUUC-Uma-129578	Ustilago maydis	43.90	2.00e-55	207.00
IUUC-Vda-129730	Verticillium dahliae	41.26	4.00e-64	236.00
IUUC-Vvi-130968	Vitis vinifera	31.95	4.00e-29	119.00
IUUC-Xtr-132203	Xenopus tropicalis	36.50	3.00e-46	176.00
IUUC-Xma-133972	Xiphophorus maculatus	36.50	6.00e-48	181.00
IUUC-Zma-134941	Zea mays	31.37	2.00e-27	114.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence