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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105412
Ensembl Protein ID ENSRNOP00000072435.1
UniProt Accession A0A0G2K2Z0; A0A0G2K2Z0_RAT
Genbank Protein ID ENSRNOP00000072435
Protein Name Echinoderm microtubule-associated protein-like 4
Genbank Nucleotide ID AABR07073201
Gene Name Eml4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000030294.5 ENSRNOT00000042307.4 ENSRNOP00000050319.3
ENSRNOG00000030294.5 ENSRNOT00000080013.1 ENSRNOP00000072435.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.10e-18 67.0 665 700
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH++ +t l++ +d +++ s s+D  i  WD+  g 
   Q: 665  GHSSYITHLDWsPDnKHIMSNSGDYEILYWDIENGC 700
           8***********998****************87765 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MPSKGQPSLR EAISMSCITN GSGINRKQNH TSSISIARKE TLSSAAKSGT EKKKEKPQGQ 60
REKKEESHSN DQSPQIRASP SPQPSSQPLQ INRQTPESKS SAPTKSIKRP PTAEKSHNSW 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105412|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTAGACGATA GCATTTCTGC TGCAAGCACC TCTGATGTTC AAGATCGTCT CTCAGCTCTG 60
GAGTCACGAG TTCAGCAACA GGAGGACGAG ATCACTGTGC TGAAGGCAGC GCTGGCTGAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105412|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF03451--HELP
PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0016020--C:membrane
GO:0015630--C:microtubule cytoskeleton
GO:0008017--F:microtubule binding
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001465 Ailuropoda melanoleuca 88.23 0.00e+00 1636.00
IUUC-Apl-003728 Anas platyrhynchos 89.11 0.00e+00 1353.00
IUUC-Aca-004921 Anolis carolinensis 73.22 0.00e+00 1343.00
IUUC-Ame-011846 Astyanax mexicanus 78.73 0.00e+00 1383.00
IUUC-Bta-013457 Bos taurus 88.23 0.00e+00 1636.00
IUUC-Cel-018623 Caenorhabditis elegans 29.10 2.00e-80 293.00
IUUC-Cja-019963 Callithrix jacchus 85.81 0.00e+00 1572.00
IUUC-Cfa-020344 Canis familiaris 89.51 0.00e+00 1630.00
IUUC-Cpo-022426 Cavia porcellus 91.18 0.00e+00 1618.00
IUUC-Csa-023822 Chlorocebus sabaeus 87.31 0.00e+00 1607.00
IUUC-Cho-024398 Choloepus hoffmanni 92.82 0.00e+00 732.00
IUUC-Dno-029822 Dasypus novemcinctus 90.07 0.00e+00 1599.00
IUUC-Dor-030881 Dipodomys ordii 89.78 0.00e+00 885.00
IUUC-Ete-032548 Echinops telfairi 76.20 0.00e+00 1205.00
IUUC-Eca-033255 Equus caballus 88.34 0.00e+00 1652.00
IUUC-Eeu-034609 Erinaceus europaeus 80.26 2.00e-134 473.00
IUUC-Fca-035637 Felis catus 89.31 0.00e+00 1665.00
IUUC-Fal-037030 Ficedula albicollis 83.82 0.00e+00 1499.00
IUUC-Gmo-038662 Gadus morhua 81.77 0.00e+00 1264.00
IUUC-Gga-041202 Gallus gallus 88.43 0.00e+00 1549.00
IUUC-Gac-041394 Gasterosteus aculeatus 74.63 0.00e+00 1298.00
IUUC-Ggo-044734 Gorilla gorilla 87.30 0.00e+00 1576.00
IUUC-Hsa-046616 Homo sapiens 87.95 0.00e+00 1623.00
IUUC-Lch-050585 Latimeria chalumnae 77.26 0.00e+00 1428.00
IUUC-Loc-052753 Lepisosteus oculatus 82.34 0.00e+00 1421.00
IUUC-Laf-054189 Loxodonta africana 84.76 0.00e+00 1563.00
IUUC-Mcc-055697 Macaca mulatta 88.38 0.00e+00 1632.00
IUUC-Mmr-060888 Microcebus murinus 88.18 0.00e+00 1590.00
IUUC-Mdo-062025 Monodelphis domestica 85.97 0.00e+00 1431.00
IUUC-Mmu-063591 Mus musculus 93.93 0.00e+00 1733.00
IUUC-Mpu-065718 Mustela putorius furo 89.42 0.00e+00 1664.00
IUUC-Mlu-068068 Myotis lucifugus 87.69 0.00e+00 1632.00
IUUC-Nle-069281 Nomascus leucogenys 86.86 0.00e+00 1568.00
IUUC-Opr-070938 Ochotona princeps 65.98 0.00e+00 1090.00
IUUC-Ont-071488 Oreochromis niloticus 72.31 0.00e+00 1252.00
IUUC-Oan-073561 Ornithorhynchus anatinus 73.03 0.00e+00 999.00
IUUC-Ocu-074399 Oryctolagus cuniculus 92.70 0.00e+00 1662.00
IUUC-Ola-086551 Oryzias latipes 71.53 0.00e+00 1258.00
IUUC-Oga-088783 Otolemur garnettii 91.52 0.00e+00 1663.00
IUUC-Oar-089716 Ovis aries 91.55 0.00e+00 1621.00
IUUC-Ptr-090942 Pan troglodytes 85.14 0.00e+00 1558.00
IUUC-Pan-091831 Papio anubis 88.59 0.00e+00 1633.00
IUUC-Psi-093094 Pelodiscus sinensis 88.17 0.00e+00 1604.00
IUUC-Pfo-097066 Poecilia formosa 66.93 0.00e+00 1221.00
IUUC-Pab-098351 Pongo abelii 87.30 0.00e+00 1576.00
IUUC-Pva-102783 Pteropus vampyrus 76.78 0.00e+00 1366.00
IUUC-Sha-106597 Sarcophilus harrisii 85.28 0.00e+00 1535.00
IUUC-Smo-108882 Selaginella moellendorffii 24.13 1.00e-12 69.30
IUUC-Sar-113748 Sorex araneus 76.82 0.00e+00 1254.00
IUUC-Ssc-115740 Sus scrofa 88.13 0.00e+00 1620.00
IUUC-Tgu-116696 Taeniopygia guttata 85.11 0.00e+00 1459.00
IUUC-Tru-118506 Takifugu rubripes 73.96 0.00e+00 1276.00
IUUC-Tsy-119375 Tarsius syrichta 78.91 0.00e+00 1416.00
IUUC-Tni-120392 Tetraodon nigroviridis 69.85 0.00e+00 1168.00
IUUC-Tbe-127468 Tupaia belangeri 81.77 0.00e+00 1446.00
IUUC-Ttr-128746 Tursiops truncatus 82.94 0.00e+00 1580.00
IUUC-Vpa-130697 Vicugna pacos 87.51 0.00e+00 1587.00
IUUC-Xtr-132731 Xenopus tropicalis 78.13 0.00e+00 1463.00
Created Date 25-Jun-2017

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