iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114863

Ensembl Protein ID

Sb02g033940.1

UniProt Accession

C5X9A0; C5X9A0_SORBI

Genbank Protein ID

EER97252.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G309600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g033940	Sb02g033940.1	Sb02g033940.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	58.14	0.00e+00	944.00	IUUC-Sce-106206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MATQPPSSAA AAVDLYETAS QPDAPAAGDA YTFLEFNTQG DDFDYPDFPE LSQPPPRSTP 60
LTSSVPGAGA SSSSWPAPPP PPSDAASPEP DLTPQDVPTP LASSSSPSPR SASKARSSAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACGC AGCCGCCCTC CTCCGCCGCT GCCGCGGTTG ACCTCTATGA GACGGCCTCG 60
CAGCCGGACG CCCCCGCCGC CGGCGACGCG TACACTTTTC TCGAGTTCAA CACGCAAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006935--Helicase/UvrB_N
IPR014001--Helicase_ATP-bd
IPR027417--P-loop_NTPase
IPR018999--RNA-helicase_UPF1_UPF2-interct

PROSITE

PS51192--HELICASE_ATP_BIND_1

Pfam

PF04851--ResIII
PF09416--UPF1_Zn_bind

Gene Ontology

GO:0005829--C:cytosol
GO:0000932--C:P-body
GO:0005886--C:plasma membrane
GO:0009506--C:plasmodesma
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0004386--F:helicase activity
GO:0003729--F:mRNA binding
GO:0008270--F:zinc ion binding
GO:0042742--P:defense response to bacterium
GO:0009867--P:jasmonic acid mediated signaling pathway
GO:0048571--P:long-day photoperiodism
GO:0000184--P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0009611--P:response to wounding
GO:0009863--P:salicylic acid mediated signaling pathway
GO:0010182--P:sugar mediated signaling pathway

KEGG

sbi:SORBI_02g033940

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000680	Aegilops tauschii	91.36	0.00e+00	1939.00
IUUC-Aml-002008	Ailuropoda melanoleuca	72.35	0.00e+00	1280.00
IUUC-Atr-002632	Amborella trichopoda	81.64	0.00e+00	1999.00
IUUC-Apl-003997	Anas platyrhynchos	72.35	0.00e+00	1278.00
IUUC-Aca-004322	Anolis carolinensis	32.32	6.00e-54	205.00
IUUC-Aly-006521	Arabidopsis lyrata	80.14	0.00e+00	1834.00
IUUC-Ath-007059	Arabidopsis thaliana	80.12	0.00e+00	1834.00
IUUC-Ago-007801	Ashbya gossypii	57.62	0.00e+00	944.00
IUUC-Acl-008312	Aspergillus clavatus	64.00	0.00e+00	1148.00
IUUC-Afl-008429	Aspergillus flavus	67.28	0.00e+00	1145.00
IUUC-Afu-009092	Aspergillus fumigatus	66.27	0.00e+00	1147.00
IUUC-Ani-009317	Aspergillus nidulans	66.95	0.00e+00	1147.00
IUUC-Ang-009783	Aspergillus niger	63.45	0.00e+00	1149.00
IUUC-Aor-010178	Aspergillus oryzae	67.28	0.00e+00	1145.00
IUUC-Ate-010294	Aspergillus terreus	66.15	0.00e+00	1152.00
IUUC-Ame-010774	Astyanax mexicanus	54.14	0.00e+00	705.00
IUUC-Bgr-012293	Blumeria graminis	66.67	0.00e+00	1138.00
IUUC-Bta-012382	Bos taurus	72.35	0.00e+00	1281.00
IUUC-Bci-013937	Botrytis cinerea	66.67	0.00e+00	1135.00
IUUC-Bdi-014612	Brachypodium distachyon	92.99	0.00e+00	2053.00
IUUC-Bol-015145	Brassica oleracea	77.81	0.00e+00	1729.00
IUUC-Bra-017370	Brassica rapa	76.56	0.00e+00	1697.00
IUUC-Cel-018240	Caenorhabditis elegans	57.14	0.00e+00	955.00
IUUC-Cja-019892	Callithrix jacchus	73.33	0.00e+00	1286.00
IUUC-Cfa-020700	Canis familiaris	72.35	0.00e+00	1281.00
IUUC-Cpo-021510	Cavia porcellus	72.23	0.00e+00	1280.00
IUUC-Cre-022731	Chlamydomonas reinhardtii	65.75	0.00e+00	1080.00
IUUC-Csa-023665	Chlorocebus sabaeus	73.33	0.00e+00	1290.00
IUUC-Cin-025798	Ciona intestinalis	71.11	0.00e+00	1160.00
IUUC-Csv-025901	Ciona savignyi	56.73	0.00e+00	1176.00
IUUC-Cgl-026653	Colletotrichum gloeosporioides	64.33	0.00e+00	1102.00
IUUC-Cne-027014	Cryptococcus neoformans	69.08	0.00e+00	1201.00
IUUC-Dre-028705	Danio rerio	73.37	0.00e+00	1282.00
IUUC-Dor-030369	Dipodomys ordii	70.99	0.00e+00	1238.00
IUUC-Dme-031767	Drosophila melanogaster	62.71	0.00e+00	1158.00
IUUC-Ete-032800	Echinops telfairi	34.30	8.00e-56	211.00
IUUC-Eca-033840	Equus caballus	73.33	0.00e+00	1287.00
IUUC-Eeu-035137	Erinaceus europaeus	38.30	1.50e-01	29.60
IUUC-Fca-035466	Felis catus	72.26	0.00e+00	1276.00
IUUC-Fal-037548	Ficedula albicollis	73.10	0.00e+00	1278.00
IUUC-Fox-038023	Fusarium oxysporum	64.33	0.00e+00	1102.00
IUUC-Gmo-039285	Gadus morhua	71.53	0.00e+00	1266.00
IUUC-Ggr-039810	Gaeumannomyces graminis	63.57	0.00e+00	1131.00
IUUC-Gga-040972	Gallus gallus	73.33	0.00e+00	1288.00
IUUC-Gac-042075	Gasterosteus aculeatus	61.78	0.00e+00	1268.00
IUUC-Gma-042713	Glycine max	79.63	0.00e+00	1964.00
IUUC-Ggo-045398	Gorilla gorilla	73.33	0.00e+00	1287.00
IUUC-Hsa-046152	Homo sapiens	73.33	0.00e+00	1290.00
IUUC-Hvu-047555	Hordeum vulgare	97.92	0.00e+00	940.00
IUUC-Itr-048247	Ictidomys tridecemlineatus	72.57	0.00e+00	1269.00
IUUC-Kpa-049205	Komagataella pastoris	49.52	0.00e+00	763.00
IUUC-Lch-049587	Latimeria chalumnae	74.05	0.00e+00	802.00
IUUC-Lpe-051059	Leersia perrieri	89.74	0.00e+00	2014.00
IUUC-Loc-051911	Lepisosteus oculatus	73.33	0.00e+00	1287.00
IUUC-Lma-053007	Leptosphaeria maculans	66.23	0.00e+00	1137.00
IUUC-Laf-054234	Loxodonta africana	72.35	0.00e+00	1281.00
IUUC-Mcc-054762	Macaca mulatta	72.35	0.00e+00	1281.00
IUUC-Meu-056677	Macropus eugenii	69.65	2.00e-133	469.00
IUUC-Mor-057147	Magnaporthe oryzae	65.69	0.00e+00	1132.00
IUUC-Mpo-057314	Magnaporthe poae	64.98	0.00e+00	1132.00
IUUC-Mtr-058329	Medicago truncatula	78.75	0.00e+00	1973.00
IUUC-Mla-059094	Melampsora laricipopulina	65.36	0.00e+00	635.00
IUUC-Mga-060126	Meleagris gallopavo	72.02	0.00e+00	1264.00
IUUC-Mvi-060373	Microbotryum violaceum	71.87	0.00e+00	1228.00
IUUC-Mmr-060628	Microcebus murinus	72.35	0.00e+00	1280.00
IUUC-Mdo-061858	Monodelphis domestica	73.33	0.00e+00	1286.00
IUUC-Mmu-064116	Mus musculus	73.09	0.00e+00	1290.00
IUUC-Mac-065136	Musa acuminata	84.99	0.00e+00	1937.00
IUUC-Mpu-066463	Mustela putorius furo	73.33	0.00e+00	1290.00
IUUC-Mlu-068098	Myotis lucifugus	73.33	0.00e+00	1289.00
IUUC-Nfi-068370	Neosartorya fischeri	66.27	0.00e+00	1147.00
IUUC-Ncr-068792	Neurospora crassa	65.11	0.00e+00	1112.00
IUUC-Nle-070102	Nomascus leucogenys	73.33	0.00e+00	1283.00
IUUC-Opr-070620	Ochotona princeps	69.01	0.00e+00	1175.00
IUUC-Ont-072685	Oreochromis niloticus	72.75	0.00e+00	1276.00
IUUC-Oan-073665	Ornithorhynchus anatinus	71.31	0.00e+00	1280.00
IUUC-Ocu-074154	Oryctolagus cuniculus	33.11	2.00e-56	213.00
IUUC-Oba-075075	Oryza barthii	89.17	0.00e+00	1733.00
IUUC-Obr-076183	Oryza brachyantha	92.84	0.00e+00	1862.00
IUUC-Ogl-077691	Oryza glaberrima	93.46	0.00e+00	2066.00
IUUC-Ogu-078423	Oryza glumaepatula	91.78	0.00e+00	2014.00
IUUC-Oin-080107	Oryza indica	93.64	0.00e+00	2068.00
IUUC-Olo-080269	Oryza longistaminata	93.18	0.00e+00	1961.00
IUUC-Ome-081779	Oryza meridionalis	91.61	0.00e+00	2009.00
IUUC-Oni-082366	Oryza nivara	93.64	0.00e+00	2070.00
IUUC-Opu-083958	Oryza punctata	90.63	0.00e+00	2041.00
IUUC-Oru-084182	Oryza rufipogon	93.64	0.00e+00	2067.00
IUUC-Osa-085285	Oryza sativa	93.54	0.00e+00	2066.00
IUUC-Ola-086954	Oryzias latipes	68.94	0.00e+00	1231.00
IUUC-Olu-087685	Ostreococcus lucimarinus	61.95	0.00e+00	1008.00
IUUC-Oga-088591	Otolemur garnettii	73.33	0.00e+00	1289.00
IUUC-Oar-089417	Ovis aries	72.23	0.00e+00	1277.00
IUUC-Ptr-091510	Pan troglodytes	72.59	0.00e+00	1268.00
IUUC-Pan-091886	Papio anubis	73.33	0.00e+00	1290.00
IUUC-Psi-093755	Pelodiscus sinensis	70.93	0.00e+00	860.00
IUUC-Pma-094470	Petromyzon marinus	67.29	0.00e+00	1273.00
IUUC-Pno-094963	Phaeosphaeria nodorum	67.28	0.00e+00	1133.00
IUUC-Ppa-095479	Physcomitrella patens	77.07	0.00e+00	1737.00
IUUC-Pfo-097456	Poecilia formosa	72.72	0.00e+00	1282.00
IUUC-Pab-098075	Pongo abelii	68.70	0.00e+00	1179.00
IUUC-Pop-099557	Populus trichocarpa	78.99	0.00e+00	1951.00
IUUC-Pca-100717	Procavia capensis	75.59	3.00e-140	492.00
IUUC-Ppe-101675	Prunus persica	81.17	0.00e+00	2014.00
IUUC-Pva-103029	Pteropus vampyrus	74.15	0.00e+00	980.00
IUUC-Pgr-103318	Puccinia graminis	67.88	0.00e+00	1164.00
IUUC-Ptt-103956	Puccinia triticina	67.19	0.00e+00	1163.00
IUUC-Pte-104399	Pyrenophora teres	66.23	0.00e+00	1137.00
IUUC-Pyt-104749	Pyrenophora triticirepentis	66.23	0.00e+00	1137.00
IUUC-Rno-105784	Rattus norvegicus	73.09	0.00e+00	1288.00
IUUC-Sce-106206	Saccharomyces cerevisiae	58.14	0.00e+00	932.00
IUUC-Sha-106566	Sarcophilus harrisii	72.17	0.00e+00	1275.00
IUUC-Sja-107721	Schizosaccharomyces japonicus	63.04	0.00e+00	1055.00
IUUC-Spo-108258	Schizosaccharomyces pombe	60.00	0.00e+00	1023.00
IUUC-Ssl-108640	Sclerotinia sclerotiorum	62.75	0.00e+00	983.00
IUUC-Smo-109676	Selaginella moellendorffii	22.64	9.00e-01	28.10
IUUC-Sit-109760	Setaria italica	97.52	0.00e+00	2185.00
IUUC-Sly-111807	Solanum lycopersicum	78.97	0.00e+00	1951.00
IUUC-Stu-112869	Solanum tuberosum	84.05	0.00e+00	1743.00
IUUC-Sar-112950	Sorex araneus	32.14	4.00e-43	169.00
IUUC-Sre-115092	Sporisorium reilianum	67.67	0.00e+00	1212.00
IUUC-Ssc-115284	Sus scrofa	35.19	1.20e-01	30.00
IUUC-Tgu-117214	Taeniopygia guttata	67.27	0.00e+00	1144.00
IUUC-Tru-118386	Takifugu rubripes	71.28	0.00e+00	1251.00
IUUC-Tsy-119550	Tarsius syrichta	68.88	5.00e-114	404.00
IUUC-Tni-120212	Tetraodon nigroviridis	71.41	0.00e+00	1228.00
IUUC-Tca-121353	Theobroma cacao	84.72	0.00e+00	1934.00
IUUC-Tre-122245	Trichoderma reesei	33.49	1.00e-51	198.00
IUUC-Tvi-122452	Trichoderma virens	63.30	0.00e+00	1079.00
IUUC-Tae-123692	Triticum aestivum	92.83	0.00e+00	2054.00
IUUC-Tur-126770	Triticum urartu	80.69	0.00e+00	1806.00
IUUC-Tme-126956	Tuber melanosporum	69.88	0.00e+00	1173.00
IUUC-Tbe-127873	Tupaia belangeri	31.78	3.00e-48	186.00
IUUC-Ttr-128212	Tursiops truncatus	68.89	0.00e+00	1176.00
IUUC-Uma-129327	Ustilago maydis	70.93	0.00e+00	1212.00
IUUC-Vda-129858	Verticillium dahliae	64.40	0.00e+00	1075.00
IUUC-Vpa-130743	Vicugna pacos	32.46	1.00e-51	197.00
IUUC-Vvi-131222	Vitis vinifera	81.37	0.00e+00	1970.00
IUUC-Xtr-131800	Xenopus tropicalis	66.04	0.00e+00	1022.00
IUUC-Xma-133216	Xiphophorus maculatus	72.72	0.00e+00	1282.00
IUUC-Yli-134482	Yarrowia lipolytica	53.50	0.00e+00	877.00
IUUC-Zma-134802	Zea mays	95.72	0.00e+00	2322.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence