iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-115657

Ensembl Protein ID

ENSSSCP00000011866.2

UniProt Accession

F1RUM5; F1RUM5_PIG

Genbank Protein ID

ENSSSCP00000011866

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU694853

Gene Name

TAF3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000011127.2	ENSSSCT00000012178.2	ENSSSCP00000011866.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.80e-09	36.9	732	778

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +C+ C ++++++  ++ C+ C++w+H+ C++++     p++ +w+CpkC 
   Q: 732  ICPGCNKPDDGS-PMIGCDGCDDWYHWPCVGIT--AAPPEEMQWFCPKCP 778
           699999999987.7*******************..44444445******6 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

EEEEEQVPTD GGTSAEAMQV PLEEDDELEE EEIINDENFL GKRPLDSPEA EELPAMKRPR 60
LISSKGDTLD VVLQEAREPL SSINTQKIPP MLSPVHVQDS ADLAPPSPEP PMLAPVAKSQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATATGTATA TTCTAATAAC TTCTTTTTCT TCCTTTACCA GAAGAAGAAG AAGAGCAGGT 60
GCCCACCGAT GGGGGCACAT CGGCAGAGGC CATGCAGGTT CCCTTGGAAG AAGATGACGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011989--ARM-like
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005669--C:transcription factor TFIID complex
GO:0008270--F:zinc ion binding
GO:0051457--P:maintenance of protein location in nucleus
GO:0043433--P:negative regulation of sequence-specific DNA binding transcription factor activity
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003831	Anas platyrhynchos	69.59	5.00e-84	305.00
IUUC-Bgr-012210	Blumeria graminis	41.07	4.00e-08	52.80
IUUC-Bta-012541	Bos taurus	81.80	3.00e-132	465.00
IUUC-Cel-018700	Caenorhabditis elegans	55.10	1.00e-14	75.10
IUUC-Cja-019753	Callithrix jacchus	90.70	4.00e-120	425.00
IUUC-Cfa-021153	Canis familiaris	90.03	2.00e-113	403.00
IUUC-Cpo-022178	Cavia porcellus	85.11	6.00e-129	454.00
IUUC-Csa-023797	Chlorocebus sabaeus	91.37	1.00e-114	407.00
IUUC-Cho-024357	Choloepus hoffmanni	81.76	7.00e-94	338.00
IUUC-Cin-025173	Ciona intestinalis	65.28	2.00e-27	114.00
IUUC-Csv-026292	Ciona savignyi	60.00	1.00e-24	106.00
IUUC-Dno-029644	Dasypus novemcinctus	85.26	1.00e-140	493.00
IUUC-Dme-031631	Drosophila melanogaster	66.67	3.00e-23	104.00
IUUC-Eeu-034542	Erinaceus europaeus	86.84	1.00e-116	414.00
IUUC-Fca-035867	Felis catus	82.15	2.00e-140	493.00
IUUC-Fal-037442	Ficedula albicollis	69.90	9.00e-96	344.00
IUUC-Gga-041093	Gallus gallus	69.04	6.00e-77	281.00
IUUC-Gac-041347	Gasterosteus aculeatus	92.75	7.00e-40	158.00
IUUC-Hsa-047012	Homo sapiens	90.30	8.00e-115	407.00
IUUC-Itr-048120	Ictidomys tridecemlineatus	90.57	7.00e-113	401.00
IUUC-Lch-049593	Latimeria chalumnae	64.64	3.00e-68	253.00
IUUC-Loc-052228	Lepisosteus oculatus	94.37	4.00e-41	160.00
IUUC-Laf-054492	Loxodonta africana	85.31	6.00e-133	468.00
IUUC-Mcc-054754	Macaca mulatta	91.37	6.00e-115	408.00
IUUC-Mmr-061146	Microcebus murinus	82.67	2.00e-139	489.00
IUUC-Mdo-062034	Monodelphis domestica	78.98	3.00e-105	376.00
IUUC-Mmu-063928	Mus musculus	73.81	2.00e-111	396.00
IUUC-Mpu-066634	Mustela putorius furo	82.94	2.00e-121	429.00
IUUC-Mlu-067116	Myotis lucifugus	81.67	3.00e-130	459.00
IUUC-Nle-069177	Nomascus leucogenys	78.04	8.00e-112	398.00
IUUC-Opr-070692	Ochotona princeps	83.63	1.00e-61	231.00
IUUC-Oan-073680	Ornithorhynchus anatinus	77.21	3.00e-89	322.00
IUUC-Ocu-074944	Oryctolagus cuniculus	81.80	2.00e-142	499.00
IUUC-Olu-087787	Ostreococcus lucimarinus	39.66	5.00e-07	49.70
IUUC-Oga-088921	Otolemur garnettii	79.35	1.00e-138	486.00
IUUC-Oar-089568	Ovis aries	81.42	5.00e-137	481.00
IUUC-Ptr-090531	Pan troglodytes	90.30	5.00e-115	408.00
IUUC-Pan-092733	Papio anubis	91.11	2.00e-114	406.00
IUUC-Psi-093411	Pelodiscus sinensis	71.84	2.00e-98	353.00
IUUC-Pma-094511	Petromyzon marinus	68.33	1.00e-27	118.00
IUUC-Pfo-096336	Poecilia formosa	55.06	3.00e-38	154.00
IUUC-Pab-098458	Pongo abelii	87.13	4.00e-105	375.00
IUUC-Pva-102128	Pteropus vampyrus	76.92	6.00e-115	408.00
IUUC-Rno-105180	Rattus norvegicus	75.74	4.00e-126	445.00
IUUC-Sha-107070	Sarcophilus harrisii	73.10	2.00e-105	376.00
IUUC-Sja-107953	Schizosaccharomyces japonicus	53.19	3.00e-11	62.80
IUUC-Spo-108245	Schizosaccharomyces pombe	58.14	2.00e-12	66.60
IUUC-Tgu-117228	Taeniopygia guttata	68.76	9.00e-89	321.00
IUUC-Tru-117787	Takifugu rubripes	86.96	9.00e-37	148.00
IUUC-Tni-119879	Tetraodon nigroviridis	88.41	2.00e-37	150.00
IUUC-Tbe-127747	Tupaia belangeri	71.88	1.00e-125	443.00
IUUC-Ttr-128397	Tursiops truncatus	89.47	4.00e-54	206.00
IUUC-Xtr-132570	Xenopus tropicalis	62.20	5.00e-73	268.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence