iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000015227.1	ENSORLT00000019078.1	ENSORLP00000019077.1
ENSORLG00000015227.1	ENSORLT00000019081.1	ENSORLP00000019080.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.60e-15	56.2	2290	2338

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C +C+ +++++k  + C++C++w+H +C+++  ++e    + + Cp+C+s
   Q: 2290 YC-ICKTPYDESKFYIGCDRCQNWYHGRCVGIL-QSEANHIDLYVCPQCQS 2338
           8*.******************************.888888888******87 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

VYDDHESDED DDAVSLRSEE DEFVEEEPQS EEDEALKEDS DCLEDDVLDE EEDAASYCTE 60
SSFRSQSTHA STPGRKKLPV PRPRTPILED KEIPSLELPE TSEDLLVPNE ELLNITSIYE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTACGACG ACCACGAGAG CGACGAGGAC GACGACGCGG TGAGCCTGAG GTCGGAGGAG 60
GACGAGTTTG TTGAGGAGGA ACCCCAGTCT GAGGAGGACG AGGCCCTCAA AGAGGACTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0103--Bromodomain
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001487--Bromodomain
IPR018359--Bromodomain_CS
IPR018501--DDT_dom
IPR028941--WHIM2_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
PS50827--DDT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00439--Bromodomain
PF02791--DDT
PF00628--PHD
PF15613--WSD

PRINTS

PR00503--BROMODOMAIN

SMART

SM00297--BROMO
SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000221	Aegilops tauschii	28.74	5.00e-11	64.30
IUUC-Aml-001431	Ailuropoda melanoleuca	62.15	0.00e+00	630.00
IUUC-Apl-003251	Anas platyrhynchos	60.57	0.00e+00	1022.00
IUUC-Aca-005148	Anolis carolinensis	88.59	1.00e-107	384.00
IUUC-Ame-011093	Astyanax mexicanus	68.60	2.00e-153	537.00
IUUC-Bta-012701	Bos taurus	62.08	7.00e-177	615.00
IUUC-Bol-015269	Brassica oleracea	27.87	4.00e-18	87.80
IUUC-Bra-018092	Brassica rapa	28.62	1.00e-17	86.30
IUUC-Cel-018283	Caenorhabditis elegans	35.40	5.00e-55	211.00
IUUC-Cja-018809	Callithrix jacchus	60.55	9.00e-130	457.00
IUUC-Cfa-021079	Canis familiaris	61.28	4.00e-177	617.00
IUUC-Cpo-021892	Cavia porcellus	66.67	6.00e-112	399.00
IUUC-Csa-023142	Chlorocebus sabaeus	64.19	1.00e-180	628.00
IUUC-Cho-024758	Choloepus hoffmanni	58.41	0.00e+00	1024.00
IUUC-Cin-025225	Ciona intestinalis	53.66	9.00e-42	165.00
IUUC-Csv-026235	Ciona savignyi	52.41	2.00e-56	211.00
IUUC-Dre-028054	Danio rerio	79.10	4.00e-178	620.00
IUUC-Dno-029508	Dasypus novemcinctus	68.63	1.00e-116	415.00
IUUC-Dor-030950	Dipodomys ordii	87.15	8.00e-103	369.00
IUUC-Dme-032140	Drosophila melanogaster	49.32	8.00e-104	373.00
IUUC-Ete-032789	Echinops telfairi	55.97	0.00e+00	903.00
IUUC-Eca-033972	Equus caballus	61.57	1.00e-177	619.00
IUUC-Eeu-034541	Erinaceus europaeus	60.16	0.00e+00	899.00
IUUC-Fca-036272	Felis catus	60.52	0.00e+00	1048.00
IUUC-Fal-037141	Ficedula albicollis	69.16	3.00e-171	597.00
IUUC-Gmo-039453	Gadus morhua	63.68	0.00e+00	963.00
IUUC-Gga-040833	Gallus gallus	73.71	4.00e-172	600.00
IUUC-Gac-041530	Gasterosteus aculeatus	63.85	0.00e+00	1777.00
IUUC-Ggo-045377	Gorilla gorilla	59.01	1.00e-127	450.00
IUUC-Hsa-046878	Homo sapiens	62.50	6.00e-180	626.00
IUUC-Hvu-047760	Hordeum vulgare	25.72	2.00e-17	85.10
IUUC-Itr-048740	Ictidomys tridecemlineatus	59.49	5.00e-120	426.00
IUUC-Lch-049744	Latimeria chalumnae	75.58	8.00e-179	622.00
IUUC-Loc-052694	Lepisosteus oculatus	74.26	2.00e-175	611.00
IUUC-Laf-054223	Loxodonta africana	62.62	0.00e+00	636.00
IUUC-Mcc-054601	Macaca mulatta	62.75	0.00e+00	629.00
IUUC-Mtr-058758	Medicago truncatula	25.07	8.00e-22	100.00
IUUC-Mga-060204	Meleagris gallopavo	71.58	8.00e-172	599.00
IUUC-Mmr-061332	Microcebus murinus	61.07	0.00e+00	1022.00
IUUC-Mdo-062245	Monodelphis domestica	63.56	2.00e-177	617.00
IUUC-Mmu-063744	Mus musculus	68.47	1.00e-177	618.00
IUUC-Mac-065252	Musa acuminata	25.81	8.00e-19	90.10
IUUC-Mpu-066289	Mustela putorius furo	62.03	1.00e-180	628.00
IUUC-Mlu-066991	Myotis lucifugus	62.32	5.00e-180	626.00
IUUC-Nle-070095	Nomascus leucogenys	61.70	4.00e-177	616.00
IUUC-Ont-071737	Oreochromis niloticus	62.43	0.00e+00	1221.00
IUUC-Oan-073261	Ornithorhynchus anatinus	74.01	3.00e-166	580.00
IUUC-Ocu-074848	Oryctolagus cuniculus	63.58	0.00e+00	633.00
IUUC-Oba-075584	Oryza barthii	29.04	2.00e-19	92.40
IUUC-Ogu-078256	Oryza glumaepatula	29.04	1.00e-19	92.80
IUUC-Oin-079426	Oryza indica	29.04	1.00e-19	92.80
IUUC-Olo-080881	Oryza longistaminata	29.04	3.00e-19	91.70
IUUC-Ome-081742	Oryza meridionalis	29.04	7.00e-20	93.60
IUUC-Oni-082756	Oryza nivara	29.04	1.00e-19	92.80
IUUC-Oru-085016	Oryza rufipogon	29.04	1.00e-19	92.80
IUUC-Oga-088994	Otolemur garnettii	62.23	3.00e-180	627.00
IUUC-Oar-090271	Ovis aries	62.08	1.00e-176	615.00
IUUC-Ptr-090821	Pan troglodytes	62.75	4.00e-180	627.00
IUUC-Psi-093425	Pelodiscus sinensis	61.48	0.00e+00	636.00
IUUC-Pma-094355	Petromyzon marinus	63.29	4.00e-139	490.00
IUUC-Pno-094853	Phaeosphaeria nodorum	39.73	8.00e-15	75.90
IUUC-Pfo-096749	Poecilia formosa	58.00	0.00e+00	1110.00
IUUC-Pab-098056	Pongo abelii	63.64	2.00e-179	624.00
IUUC-Pop-099219	Populus trichocarpa	30.59	5.00e-12	67.80
IUUC-Pca-100922	Procavia capensis	75.46	4.00e-124	440.00
IUUC-Pva-103167	Pteropus vampyrus	72.35	4.00e-178	620.00
IUUC-Pgr-103292	Puccinia graminis	48.21	3.00e-14	72.80
IUUC-Ptt-104009	Puccinia triticina	39.02	6.00e-16	78.60
IUUC-Rno-105749	Rattus norvegicus	62.94	4.00e-163	570.00
IUUC-Sha-106874	Sarcophilus harrisii	67.78	4.00e-177	617.00
IUUC-Stu-112841	Solanum tuberosum	42.55	1.00e-09	57.00
IUUC-Sar-113725	Sorex araneus	76.44	6.00e-172	599.00
IUUC-Tgu-117339	Taeniopygia guttata	86.03	6.00e-101	362.00
IUUC-Tru-118594	Takifugu rubripes	58.77	0.00e+00	1053.00
IUUC-Tni-120313	Tetraodon nigroviridis	54.19	0.00e+00	1064.00
IUUC-Tbe-127684	Tupaia belangeri	78.50	2.00e-137	484.00
IUUC-Ttr-128434	Tursiops truncatus	74.21	4.00e-176	613.00
IUUC-Vpa-130338	Vicugna pacos	51.50	4.00e-154	540.00
IUUC-Xtr-132434	Xenopus tropicalis	74.81	4.00e-170	593.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence