iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099125

Ensembl Protein ID

POPTR_0010s19540.1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s19540	POPTR_0010s19540.1	POPTR_0010s19540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.70e-09	36.9	60	110

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           + C  Cg +++ ++  + C++C++w+H +C+k++   + ++ +++ Cp+C+ 
   Q: 60   TLCGSCGGNYNADEFWIGCDICERWYHGKCVKIT-PAKAESIKQYKCPSCST 110
           57999*****************************.888888889******86 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MVNDLPTLFE IVTGRKPVED KPSADGGSKS RNNTKRSTDG QARSNSKLSY VEDEDEHGDT 60
LCGSCGGNYN ADEFWIGCDI CERWYHGKCV KITPAKAESI KQYKCPSCST KKSRH 115

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Nucleotide Sequence
(Fasta)

GAAGCGACTG TTTAGCATGG TAAATGATCT GCCCACCCTC TTTGAAATTG TGACCGGGAG 60
GAAACCAGTA GAAGATAAGC CTAGTGCTGA CGGTGGTAGC AAATCCAGGA ATAACACAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005148	Anolis carolinensis	43.75	4.00e-10	60.10
IUUC-Cja-018809	Callithrix jacchus	45.83	3.00e-10	60.10
IUUC-Ggo-045377	Gorilla gorilla	45.83	3.00e-10	60.80
IUUC-Olu-087633	Ostreococcus lucimarinus	43.59	4.00e-07	49.30
IUUC-Sit-110440	Setaria italica	59.32	1.00e-40	157.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence