iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095852

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545283

Gene Name

PHYPADRAFT_153687

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S398_19V6	PP1S398_19V6.1	PP1S398_19V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-38	128.0	477	513
E3 activity/RING/RING	4.40e-07	31.1	5	47
UBD/Beta-Prp	1.60e-73	248.2	308	531

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH ++v +++  ++  +l++GsdD+t++vWDlr g++
   Q: 477  GHLEDVIGVDIdDSgMYLATGSDDKTCRVWDLRMGHP 513
           79999******733599***************99876 PP

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e      k + ++++CgHvf++dC   w       ++e +CP+Cr
   Q: 5    CKICFENAsgqgK-QARITSCGHVFCHDCATIW------FRTETNCPVCR 47
           99****9988844.49*****************......**********8 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsf 102
           h+++++ +++ p+++l+at+s+d+  +v+dv+ +  ++ lsgh  + +avkfsp +  +  t+s+D+t ++w+ +tg+c+++l+gh+d+v  lsf
   Q: 308  HSGPVHGIAVNPSGNLVATASWDHLCRVYDVHLEEEVAVLSGHLLGLYAVKFSPAKRdLVGTVSSDQTCRLWNTDTGECLRVLEGHTDEVNGLSF 402
           8999**************************************************98757789********************************* PP
   S: 103  spsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelv 196
            p ++ l+++s+d t ++wd e+g  +  tl+gh++ v +v+++p+g nl++++s D t +lWd +t + ++tl+g h ++v  +++d++g +l+
   Q: 403  KPGTHLLATASDDATSMIWDAEKGISVT-TLKGHRHGVYGVCFQPSGgNLVATASFDFTAKLWDPRTSEDVQTLRG-HLEDVIGVDIDDSGMYLA 495
           **99***********************9.**********************************************9.****************** PP
   S: 197  sgsldgtvklwdlqtgecvrtlnghtdnvksvrfsp 232
           +gs+d+t ++wdl+ g+ ++ l++h+  vk+v fsp
   Q: 496  TGSDDKTCRVWDLRMGHPIVVLQAHSGEVKRVVFSP 531
           ********************************9985 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGLTCKICFE NASGQGKQAR ITSCGHVFCH DCATIWFRTE TNCPVCRNTV AGFSGLIALF 60
DHDAGLQSPS LGFDDEISEN EGEILGISGC EDGQVRDGSS GAKSSGVGAS GAGENGAIQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTCTTA CCTGTAAAAT ATGCTTCGAA AACGCCTCAG GGCAGGGCAA GCAAGCTCGA 60
ATTACATCCT GCGGCCATGT GTTTTGCCAC GATTGTGCAA CTATTTGGTT TCGCACGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_153687

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002244	Ailuropoda melanoleuca	35.81	2.00e-52	199.00
IUUC-Apl-003764	Anas platyrhynchos	34.85	3.00e-48	185.00
IUUC-Bta-013294	Bos taurus	33.33	3.00e-47	181.00
IUUC-Cja-018728	Callithrix jacchus	34.63	2.00e-50	192.00
IUUC-Cfa-021122	Canis familiaris	35.69	4.00e-51	194.00
IUUC-Cpo-021472	Cavia porcellus	36.60	2.00e-54	205.00
IUUC-Csa-023349	Chlorocebus sabaeus	34.30	1.00e-51	196.00
IUUC-Eca-034088	Equus caballus	35.62	2.00e-51	195.00
IUUC-Fca-036058	Felis catus	35.15	4.00e-51	194.00
IUUC-Fal-036638	Ficedula albicollis	36.52	9.00e-49	186.00
IUUC-Gga-040984	Gallus gallus	34.41	3.00e-50	191.00
IUUC-Ggo-044596	Gorilla gorilla	36.97	1.00e-46	180.00
IUUC-Hsa-046535	Homo sapiens	34.63	7.00e-53	200.00
IUUC-Laf-053877	Loxodonta africana	34.97	1.00e-50	192.00
IUUC-Mcc-055010	Macaca mulatta	34.30	1.00e-51	196.00
IUUC-Mga-059883	Meleagris gallopavo	31.73	5.00e-49	187.00
IUUC-Mmr-061645	Microcebus murinus	34.63	2.00e-51	195.00
IUUC-Mpu-066807	Mustela putorius furo	35.12	1.00e-51	196.00
IUUC-Nle-069067	Nomascus leucogenys	34.63	4.00e-52	197.00
IUUC-Opr-070841	Ochotona princeps	29.59	9.00e-42	163.00
IUUC-Ola-087021	Oryzias latipes	36.27	1.00e-50	192.00
IUUC-Oga-088193	Otolemur garnettii	34.30	2.00e-50	192.00
IUUC-Oar-089207	Ovis aries	35.28	7.00e-53	200.00
IUUC-Ptr-091298	Pan troglodytes	34.63	2.00e-52	198.00
IUUC-Pan-092620	Papio anubis	36.16	4.00e-46	177.00
IUUC-Pab-098360	Pongo abelii	34.63	7.00e-52	197.00
IUUC-Pva-102206	Pteropus vampyrus	34.11	1.00e-49	189.00
IUUC-Sha-106970	Sarcophilus harrisii	35.84	9.00e-53	200.00
IUUC-Smo-108739	Selaginella moellendorffii	79.72	1.00e-138	484.00
IUUC-Ssc-115618	Sus scrofa	33.76	7.00e-49	187.00
IUUC-Tgu-117237	Taeniopygia guttata	36.27	5.00e-53	201.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence