iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Rno-106041

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Membrane-associated ring-CH-type finger 1

Genbank Nucleotide ID

AABR07025005

Gene Name

March1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000026310.3	ENSRNOT00000032289.3	ENSRNOP00000038896.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	95.24	6.00e-131	464.00	IUUC-Hsa-046201

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

FQNEKSPGRS ASRSSNISKA SSPTTGTAPR SQSRLSVCPS TQDICRICHC EGDEESPLIT 60
PCRCTGTLRF VHQSCLHQWI KSSDTRCCEL CKYDFIMETK LKPLRKWEKL QMTTSERRKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCAGAATG AAAAGTCCCC AGGGCGATCT GCAAGTCGAT CAAGTAACAT ATCAAAAGTA 60
GGTGCCTCTC TCCATGTTCT TGTTTGTTGA GTTTTGCATT TCACAAGTTC AATGAATATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033275--MARCH-like
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51292--ZF_RING_CH

Pfam

PF12906--RINGv

SMART

SM00744--RINGv

Gene Ontology

GO:0031901--C:early endosome membrane
GO:0005789--C:endoplasmic reticulum membrane
GO:0016021--C:integral component of membrane
GO:0031902--C:late endosome membrane
GO:0005765--C:lysosomal membrane
GO:0005886--C:plasma membrane
GO:0032588--C:trans-Golgi network membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0002495--P:antigen processing and presentation of peptide antigen via MHC class II
GO:0006955--P:immune response
GO:0000209--P:protein polyubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001621	Ailuropoda melanoleuca	94.37	3.00e-131	460.00
IUUC-Aca-004316	Anolis carolinensis	86.96	3.00e-131	461.00
IUUC-Cja-019593	Callithrix jacchus	94.81	2.00e-131	461.00
IUUC-Cfa-020376	Canis familiaris	95.77	3.00e-121	427.00
IUUC-Cpo-021447	Cavia porcellus	94.81	1.00e-130	459.00
IUUC-Cho-024995	Choloepus hoffmanni	98.48	8.00e-74	268.00
IUUC-Cin-025566	Ciona intestinalis	62.12	5.00e-16	77.80
IUUC-Dor-030770	Dipodomys ordii	73.59	1.00e-94	339.00
IUUC-Eeu-034876	Erinaceus europaeus	92.06	3.00e-139	487.00
IUUC-Fca-035915	Felis catus	94.81	1.00e-131	462.00
IUUC-Gga-041073	Gallus gallus	89.33	4.00e-133	466.00
IUUC-Ggo-045247	Gorilla gorilla	95.24	3.00e-132	464.00
IUUC-Hsa-046201	Homo sapiens	95.24	2.00e-132	464.00
IUUC-Lch-049814	Latimeria chalumnae	88.75	2.00e-115	407.00
IUUC-Mcc-055170	Macaca mulatta	94.81	2.00e-131	461.00
IUUC-Meu-056594	Macropus eugenii	67.42	3.00e-43	167.00
IUUC-Mga-059662	Meleagris gallopavo	86.96	5.00e-129	453.00
IUUC-Mmr-060572	Microcebus murinus	94.81	1.00e-131	461.00
IUUC-Mdo-062427	Monodelphis domestica	92.34	5.00e-130	456.00
IUUC-Mmu-063388	Mus musculus	99.57	8.00e-137	479.00
IUUC-Nle-069120	Nomascus leucogenys	95.24	3.00e-132	464.00
IUUC-Oan-072984	Ornithorhynchus anatinus	90.48	5.00e-137	479.00
IUUC-Ocu-074267	Oryctolagus cuniculus	95.24	7.00e-132	462.00
IUUC-Ptr-090476	Pan troglodytes	95.24	3.00e-132	464.00
IUUC-Pan-092390	Papio anubis	95.28	1.00e-132	465.00
IUUC-Psi-093584	Pelodiscus sinensis	89.68	1.00e-134	472.00
IUUC-Pca-100362	Procavia capensis	68.10	8.00e-87	313.00
IUUC-Sha-107488	Sarcophilus harrisii	91.77	6.00e-127	446.00
IUUC-Sar-113258	Sorex araneus	93.43	8.00e-118	416.00
IUUC-Sbi-113840	Sorghum bicolor	29.68	7.00e-10	57.40
IUUC-Tgu-116539	Taeniopygia guttata	89.33	2.00e-133	468.00
IUUC-Tsy-119324	Tarsius syrichta	94.37	2.00e-130	457.00
IUUC-Tbe-127567	Tupaia belangeri	91.77	2.00e-127	447.00
IUUC-Ttr-129098	Tursiops truncatus	91.38	2.00e-125	441.00
IUUC-Vpa-130287	Vicugna pacos	71.00	3.00e-89	321.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence