iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129933

Ensembl Protein ID

EGY13851

UniProt Accession

G2WQ91; G2WQ91_VERDV

Genbank Protein ID

EGY13851.1

Protein Name

DNA repair protein RAD16

Genbank Nucleotide ID

DS572695

Gene Name

VDAG_00533

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_00533	EGY13851	EGY13851

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.70e-07	30.7	705	743
E3 activity/RING/U-box	2.10e-07	30.0	704	751

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +++ p+++ C+Hv+++ C+ k+         + +CP Cr
   Q: 705  CPICFDTLSE-PVITHCKHVYCRRCITKV------IELQRKCPMCR 743
           **********.999***************......**********8 PP

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl 55
            CpI ++  ++Pv++ + ++y r++I k ++ ++k cP++rqpl  ++l
   Q: 704  DCPICFDTLSEPVITHCKHVYCRRCITKVIELQRK-CPMCRQPLGVDSL 751
           6*********************************9.********76666 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MSVPKRSHDV IDLTDDADEG GGRNETFSGA PQRKRHAPSS HPSQSSPSRG RKPSSQPSLS 60
QRHNATSTSQ SSWSPQVSQH WAPQNGRVYA SSSQPIADDV EVIDLTQSND EPPMEFYGSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCAGTTC CAAAGAGGTC TCACGACGTC ATCGACCTCA CAGACGATGC CGACGAAGGC 60
GGTGGTAGGA ACGAAACCTT CTCAGGAGCG CCTCAACGCA AGAGACATGC TCCGTCATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

KEGG

vda:VDAG_00533

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001237	Ailuropoda melanoleuca	36.25	2.00e-78	285.00
IUUC-Apl-003679	Anas platyrhynchos	27.43	3.00e-58	218.00
IUUC-Aca-004994	Anolis carolinensis	37.52	3.00e-87	314.00
IUUC-Aly-005898	Arabidopsis lyrata	29.80	1.00e-83	302.00
IUUC-Ath-007559	Arabidopsis thaliana	29.27	4.00e-100	357.00
IUUC-Acl-008053	Aspergillus clavatus	46.93	0.00e+00	725.00
IUUC-Afl-008697	Aspergillus flavus	46.26	0.00e+00	733.00
IUUC-Afu-008767	Aspergillus fumigatus	48.05	0.00e+00	747.00
IUUC-Ani-009435	Aspergillus nidulans	45.68	0.00e+00	681.00
IUUC-Ang-009635	Aspergillus niger	50.00	1.00e-176	611.00
IUUC-Aor-010130	Aspergillus oryzae	50.77	0.00e+00	636.00
IUUC-Ate-010582	Aspergillus terreus	44.88	0.00e+00	701.00
IUUC-Bta-013391	Bos taurus	36.25	4.00e-85	308.00
IUUC-Bci-013956	Botrytis cinerea	47.51	0.00e+00	765.00
IUUC-Bdi-014267	Brachypodium distachyon	33.94	6.00e-90	323.00
IUUC-Bol-016075	Brassica oleracea	29.86	4.00e-101	360.00
IUUC-Bra-017057	Brassica rapa	32.56	3.00e-90	324.00
IUUC-Cja-019685	Callithrix jacchus	36.25	3.00e-84	305.00
IUUC-Cfa-020485	Canis familiaris	35.73	4.00e-78	284.00
IUUC-Cpo-021361	Cavia porcellus	35.48	4.00e-78	283.00
IUUC-Cre-022824	Chlamydomonas reinhardtii	27.32	1.00e-44	174.00
IUUC-Csa-023894	Chlorocebus sabaeus	36.25	1.00e-84	306.00
IUUC-Csv-026168	Ciona savignyi	26.37	1.00e-44	173.00
IUUC-Cgl-026695	Colletotrichum gloeosporioides	56.30	0.00e+00	884.00
IUUC-Cne-026829	Cryptococcus neoformans	33.59	1.00e-124	439.00
IUUC-Dre-027867	Danio rerio	34.55	2.00e-85	309.00
IUUC-Dno-029517	Dasypus novemcinctus	36.43	4.00e-81	294.00
IUUC-Dse-031564	Dothistroma septosporum	48.16	5.00e-123	432.00
IUUC-Ete-032421	Echinops telfairi	28.11	4.00e-52	197.00
IUUC-Eca-034058	Equus caballus	34.99	4.00e-75	275.00
IUUC-Fca-035390	Felis catus	36.25	2.00e-78	285.00
IUUC-Fal-037486	Ficedula albicollis	27.51	1.00e-59	223.00
IUUC-Fox-037751	Fusarium oxysporum	55.83	0.00e+00	918.00
IUUC-Fso-038411	Fusarium solani	53.97	0.00e+00	899.00
IUUC-Gmo-038544	Gadus morhua	35.71	5.00e-86	310.00
IUUC-Gga-040472	Gallus gallus	28.02	3.00e-61	229.00
IUUC-Gac-042401	Gasterosteus aculeatus	35.07	7.00e-89	320.00
IUUC-Ggo-045628	Gorilla gorilla	36.25	1.00e-84	306.00
IUUC-Hsa-045930	Homo sapiens	36.25	6.00e-85	307.00
IUUC-Itr-048493	Ictidomys tridecemlineatus	36.36	9.00e-85	306.00
IUUC-Lch-050617	Latimeria chalumnae	35.36	6.00e-86	310.00
IUUC-Lpe-051724	Leersia perrieri	34.51	7.00e-94	336.00
IUUC-Loc-052785	Lepisosteus oculatus	35.70	1.00e-89	322.00
IUUC-Laf-054309	Loxodonta africana	35.05	1.00e-77	283.00
IUUC-Mcc-055493	Macaca mulatta	35.85	6.00e-85	307.00
IUUC-Mor-056943	Magnaporthe oryzae	50.22	0.00e+00	836.00
IUUC-Mtr-058172	Medicago truncatula	30.58	3.00e-101	361.00
IUUC-Mga-059553	Meleagris gallopavo	26.82	4.00e-58	218.00
IUUC-Mvi-060365	Microbotryum violaceum	30.14	4.00e-80	291.00
IUUC-Mmr-061043	Microcebus murinus	35.85	2.00e-78	285.00
IUUC-Mmu-064338	Mus musculus	34.25	8.00e-85	306.00
IUUC-Mpu-066781	Mustela putorius furo	36.25	2.00e-78	285.00
IUUC-Mlu-068076	Myotis lucifugus	36.62	2.00e-81	295.00
IUUC-Nfi-068386	Neosartorya fischeri	48.64	0.00e+00	745.00
IUUC-Ncr-068858	Neurospora crassa	55.79	0.00e+00	960.00
IUUC-Nle-069947	Nomascus leucogenys	36.25	6.00e-85	307.00
IUUC-Ont-071782	Oreochromis niloticus	34.64	1.00e-82	299.00
IUUC-Oan-073331	Ornithorhynchus anatinus	34.01	2.00e-79	288.00
IUUC-Ocu-074705	Oryctolagus cuniculus	36.50	6.00e-87	313.00
IUUC-Oba-075881	Oryza barthii	34.54	1.00e-91	328.00
IUUC-Ogl-076957	Oryza glaberrima	34.54	1.00e-91	328.00
IUUC-Ogu-078648	Oryza glumaepatula	33.69	1.00e-86	312.00
IUUC-Oin-079449	Oryza indica	33.69	5.00e-87	313.00
IUUC-Olo-080721	Oryza longistaminata	33.49	5.00e-85	306.00
IUUC-Ome-081579	Oryza meridionalis	33.64	1.00e-85	309.00
IUUC-Oni-083054	Oryza nivara	33.69	5.00e-87	313.00
IUUC-Opu-083706	Oryza punctata	33.33	7.00e-86	310.00
IUUC-Oru-085259	Oryza rufipogon	33.69	7.00e-87	313.00
IUUC-Osa-085568	Oryza sativa	32.96	9.00e-76	276.00
IUUC-Ola-086830	Oryzias latipes	32.22	3.00e-75	275.00
IUUC-Oga-088120	Otolemur garnettii	36.43	1.00e-73	269.00
IUUC-Oar-089293	Ovis aries	36.25	3.00e-85	308.00
IUUC-Ptr-091418	Pan troglodytes	36.06	8.00e-85	306.00
IUUC-Pan-092579	Papio anubis	35.92	3.00e-44	171.00
IUUC-Psi-093626	Pelodiscus sinensis	37.33	5.00e-86	310.00
IUUC-Pno-094841	Phaeosphaeria nodorum	42.75	0.00e+00	660.00
IUUC-Pfo-096540	Poecilia formosa	36.13	2.00e-89	322.00
IUUC-Pab-098010	Pongo abelii	36.25	8.00e-85	306.00
IUUC-Pca-100648	Procavia capensis	33.82	4.00e-79	287.00
IUUC-Ppe-102077	Prunus persica	30.99	4.00e-94	337.00
IUUC-Pva-102896	Pteropus vampyrus	37.75	3.00e-68	251.00
IUUC-Rno-106130	Rattus norvegicus	35.60	2.00e-86	312.00
IUUC-Ssl-108383	Sclerotinia sclerotiorum	48.57	0.00e+00	766.00
IUUC-Smo-109311	Selaginella moellendorffii	30.93	1.00e-88	319.00
IUUC-Sit-109770	Setaria italica	33.99	4.00e-91	327.00
IUUC-Sar-113719	Sorex araneus	36.62	1.00e-87	316.00
IUUC-Ssc-116186	Sus scrofa	36.06	5.00e-85	307.00
IUUC-Tru-117768	Takifugu rubripes	34.76	9.00e-78	283.00
IUUC-Tsy-118957	Tarsius syrichta	35.16	6.00e-79	287.00
IUUC-Tni-120618	Tetraodon nigroviridis	35.39	4.00e-88	317.00
IUUC-Tre-122007	Trichoderma reesei	55.53	0.00e+00	922.00
IUUC-Tvi-122492	Trichoderma virens	53.43	0.00e+00	964.00
IUUC-Tae-125897	Triticum aestivum	35.28	4.00e-94	337.00
IUUC-Ttr-128243	Tursiops truncatus	36.25	7.00e-42	164.00
IUUC-Vpa-130672	Vicugna pacos	35.93	1.00e-80	293.00
IUUC-Xtr-132730	Xenopus tropicalis	36.17	3.00e-85	308.00
IUUC-Xma-133384	Xiphophorus maculatus	36.06	1.00e-89	322.00
IUUC-Zma-134966	Zea mays	34.84	1.00e-95	342.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence