iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cja-019808

Ensembl Protein ID

ENSCJAP00000006861.2

UniProt Accession

F7CXL0; F7CXL0_CALJA

Genbank Protein ID

JAB08935.1; JAB12340.1; JAB41602.1

Protein Name

TATA box-binding protein-associated factor RNA polymerase I subunit D

Genbank Nucleotide ID

ACFV01102825; GAMS01010796; GAMQ01000249

Gene Name

TAF1D

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000003782.2	ENSCJAT00000007247.2	ENSCJAP00000006861.2
ENSCJAG00000003782.2	ENSCJAT00000007242.2	ENSCJAP00000006856.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	89.93	2.00e-101	366.00	IUUC-Hsa-046930

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MDKSGIDSLD YVTSDAMEPA NQSDNSSDSS LFKTQCVPYS PKQGQRNPIR KCVRTPGNVQ 60
ASDSSSDSSF EPIPLTMKAI FERFKNRKKK YKKKKKRYQP TGRPRGRPEG RRNPLCSLID 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTAGAAAA CTGTTCGGAA ATCAAAATCT ATGTATCATA TATGCATACA TAAATACCCA 60
CATCACCATA ATTTGTGTAT TTTACCAACC AGTTTAATAG AAGCAAGTTT TCTGGCTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027976--TAF1D

Pfam

PF15333--TAF1D

Gene Ontology

GO:0005815--C:microtubule organizing center
GO:0005654--C:nucleoplasm
GO:0005668--C:RNA polymerase transcription factor SL1 complex
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

cjc:100385014

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001853	Ailuropoda melanoleuca	67.07	2.00e-52	199.00
IUUC-Apl-003575	Anas platyrhynchos	42.37	2.00e-21	95.90
IUUC-Aca-004568	Anolis carolinensis	46.83	3.00e-27	114.00
IUUC-Ath-007525	Arabidopsis thaliana	25.37	2.20e+00	26.90
IUUC-Bta-013078	Bos taurus	63.70	4.00e-41	161.00
IUUC-Cfa-020525	Canis familiaris	66.42	4.00e-53	201.00
IUUC-Cpo-021896	Cavia porcellus	54.26	2.00e-55	209.00
IUUC-Csa-024108	Chlorocebus sabaeus	88.13	2.00e-112	398.00
IUUC-Cho-024326	Choloepus hoffmanni	65.57	1.00e-65	242.00
IUUC-Dno-029104	Dasypus novemcinctus	66.67	3.00e-62	231.00
IUUC-Dor-030151	Dipodomys ordii	60.29	1.00e-46	179.00
IUUC-Ete-033189	Echinops telfairi	64.59	6.00e-53	200.00
IUUC-Eca-034238	Equus caballus	71.89	2.00e-76	278.00
IUUC-Fca-035711	Felis catus	67.07	4.00e-62	231.00
IUUC-Fal-037067	Ficedula albicollis	51.09	2.00e-21	95.50
IUUC-Gga-040782	Gallus gallus	41.41	1.00e-22	100.00
IUUC-Ggo-045155	Gorilla gorilla	88.85	9.00e-112	395.00
IUUC-Hsa-046930	Homo sapiens	89.93	5.00e-114	403.00
IUUC-Loc-052935	Lepisosteus oculatus	29.90	1.50e-02	35.00
IUUC-Laf-054040	Loxodonta africana	64.95	3.00e-59	221.00
IUUC-Mga-059429	Meleagris gallopavo	41.38	4.00e-22	98.60
IUUC-Mmr-061505	Microcebus murinus	68.27	3.00e-71	261.00
IUUC-Mdo-062193	Monodelphis domestica	46.30	1.00e-27	116.00
IUUC-Mmu-064127	Mus musculus	51.59	6.00e-52	197.00
IUUC-Mpu-065682	Mustela putorius furo	67.49	2.00e-45	175.00
IUUC-Mlu-067425	Myotis lucifugus	65.22	5.00e-73	267.00
IUUC-Nle-069897	Nomascus leucogenys	88.13	3.00e-113	400.00
IUUC-Opr-071021	Ochotona princeps	59.60	2.00e-52	198.00
IUUC-Oan-072853	Ornithorhynchus anatinus	50.41	4.00e-28	120.00
IUUC-Ocu-074088	Oryctolagus cuniculus	61.73	1.00e-55	209.00
IUUC-Oga-089058	Otolemur garnettii	64.86	8.00e-73	266.00
IUUC-Oar-089404	Ovis aries	63.27	5.00e-45	174.00
IUUC-Ptr-091491	Pan troglodytes	88.13	5.00e-112	397.00
IUUC-Pan-092706	Papio anubis	88.49	2.00e-113	401.00
IUUC-Psi-093986	Pelodiscus sinensis	42.62	7.00e-20	91.30
IUUC-Pab-097567	Pongo abelii	88.49	1.00e-114	405.00
IUUC-Pva-103062	Pteropus vampyrus	67.09	2.00e-66	244.00
IUUC-Rno-105375	Rattus norvegicus	59.84	3.00e-51	195.00
IUUC-Sha-106880	Sarcophilus harrisii	50.93	1.00e-36	146.00
IUUC-Ssc-115335	Sus scrofa	64.29	2.00e-21	94.00
IUUC-Tgu-117094	Taeniopygia guttata	52.17	1.00e-21	96.30
IUUC-Tsy-119189	Tarsius syrichta	67.34	1.00e-62	232.00
IUUC-Tbe-128047	Tupaia belangeri	58.70	2.00e-60	224.00
IUUC-Ttr-128715	Tursiops truncatus	67.38	2.00e-75	275.00
IUUC-Vpa-130195	Vicugna pacos	63.35	1.00e-70	259.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence