iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000010813.3	ENSXETT00000023655.2	ENSXETP00000023655.2
ENSXETG00000010813.3	ENSXETT00000066069.1	ENSXETP00000062745.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.00e-48	158.5	138	176
UBD/Beta-Prp	4.50e-69	233.1	93	311

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H ++v+c +f +d +l+vs+sdD+tik+WD ++  +++s
   Q: 138  HINWVRCAKFsPDrRLIVSASDDKTIKLWDKTSRECIHS 176
           999**********9*****************99999875 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsgh 136
           ++ h+++v++v+fs dg+ lvt+s+D+tikvw +   k + +l++h + v++ +fsp++  +vs+s+d+ti++wd  +++c++  + +h
   Q: 93   FKAHTGTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDRRLIVSASDDKTIKLWDKTSRECIH-SFCEH 180
           589********************************************************************************.***** PP
   S: 137  dgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnv 225
            g+vn v +hp+g +++++++D+tv++Wd++++kl+++ +  h + v+slsf+++g++l+++s+d+t+k+ dl +g+ ++tl+gh+   
   Q: 181  GGFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQV-HSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGLL 268
           ****************************************8.*********************************************** PP
   S: 226  ksvrfspnderlvsgssDgsiriW..dlrsgdllktlqlhn.s 265
           +sv +s  ++  +sg     + +W  + +s  +   l++++ +
   Q: 269  LSVSTSLSGNCEASGCLASEVMVWktNFDSASYADLLKYRQhD 311
           ************************9988888888888887733 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

EDPSLERHFK GHRDTVTTVD FNPNTKQLAS GSMDSCLMIW NMKPQMRAYR FVGHKDAILS 60
VDFSPSGHLI ASASRDKTVR LWVPSVKGES TVFKAHTGTV RSVSFSGDGQ SLVTASDDKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGGGC AGCCGGTAAG TTGTCATTGC TTGCTGCTTA TTTCCCTGCA GTTGTGCCAC 60
TGCGATTTGC GCCTGCTGTC ATTTACAGCT ATTCTATCCT TATACTCTCN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003466	Anas platyrhynchos	66.37	8.00e-170	589.00
IUUC-Aca-004323	Anolis carolinensis	68.61	5.00e-173	600.00
IUUC-Bta-012484	Bos taurus	63.29	3.00e-161	560.00
IUUC-Cja-019067	Callithrix jacchus	61.56	3.00e-154	537.00
IUUC-Cfa-020439	Canis familiaris	62.67	3.00e-160	557.00
IUUC-Cpo-021403	Cavia porcellus	62.84	2.00e-160	558.00
IUUC-Cre-022724	Chlamydomonas reinhardtii	57.77	2.00e-105	375.00
IUUC-Csa-023479	Chlorocebus sabaeus	73.85	4.00e-127	447.00
IUUC-Cho-024354	Choloepus hoffmanni	74.55	1.00e-99	355.00
IUUC-Cin-025258	Ciona intestinalis	57.78	4.00e-153	534.00
IUUC-Csv-025955	Ciona savignyi	56.64	7.00e-136	476.00
IUUC-Dor-030399	Dipodomys ordii	62.92	1.00e-159	555.00
IUUC-Eca-034425	Equus caballus	60.36	3.00e-149	521.00
IUUC-Eeu-034607	Erinaceus europaeus	61.28	7.00e-116	410.00
IUUC-Fca-035627	Felis catus	63.06	2.00e-159	555.00
IUUC-Fal-037381	Ficedula albicollis	65.10	1.00e-165	575.00
IUUC-Gmo-038489	Gadus morhua	70.86	1.00e-135	476.00
IUUC-Gga-040559	Gallus gallus	64.88	3.00e-161	561.00
IUUC-Gac-041453	Gasterosteus aculeatus	63.57	4.00e-157	547.00
IUUC-Ggo-044773	Gorilla gorilla	76.47	1.00e-144	506.00
IUUC-Hsa-045823	Homo sapiens	75.24	4.00e-144	503.00
IUUC-Itr-048560	Ictidomys tridecemlineatus	62.56	4.00e-159	553.00
IUUC-Lch-050558	Latimeria chalumnae	68.76	5.00e-176	610.00
IUUC-Loc-052836	Lepisosteus oculatus	69.30	1.00e-178	618.00
IUUC-Laf-053974	Loxodonta africana	57.08	3.00e-137	481.00
IUUC-Mcc-055494	Macaca mulatta	73.75	3.00e-141	494.00
IUUC-Meu-056646	Macropus eugenii	68.55	3.00e-113	401.00
IUUC-Mga-059295	Meleagris gallopavo	65.04	1.00e-160	559.00
IUUC-Mmr-061040	Microcebus murinus	62.95	1.00e-159	555.00
IUUC-Mdo-062519	Monodelphis domestica	78.64	1.00e-149	522.00
IUUC-Mmu-063759	Mus musculus	76.09	1.00e-136	479.00
IUUC-Mpu-066442	Mustela putorius furo	62.39	2.00e-157	548.00
IUUC-Mlu-068163	Myotis lucifugus	63.84	3.00e-161	561.00
IUUC-Nle-070160	Nomascus leucogenys	74.92	1.00e-143	502.00
IUUC-Opr-070192	Ochotona princeps	58.80	5.00e-136	477.00
IUUC-Ont-072539	Oreochromis niloticus	77.20	2.00e-145	508.00
IUUC-Ocu-074624	Oryctolagus cuniculus	60.77	2.00e-142	498.00
IUUC-Ola-087268	Oryzias latipes	60.22	1.00e-158	552.00
IUUC-Oga-088964	Otolemur garnettii	59.78	5.00e-148	517.00
IUUC-Oar-090202	Ovis aries	74.84	3.00e-146	511.00
IUUC-Ptr-091164	Pan troglodytes	75.24	3.00e-144	504.00
IUUC-Pan-092805	Papio anubis	73.14	1.00e-126	445.00
IUUC-Psi-093359	Pelodiscus sinensis	83.55	1.00e-156	545.00
IUUC-Pma-094425	Petromyzon marinus	63.33	4.00e-162	564.00
IUUC-Ppa-095677	Physcomitrella patens	47.06	6.00e-83	300.00
IUUC-Pab-098376	Pongo abelii	62.97	3.00e-159	554.00
IUUC-Pca-101122	Procavia capensis	64.29	3.00e-163	567.00
IUUC-Rno-105282	Rattus norvegicus	59.13	3.00e-135	474.00
IUUC-Sha-106840	Sarcophilus harrisii	78.24	2.00e-115	408.00
IUUC-Smo-108731	Selaginella moellendorffii	45.93	4.00e-77	281.00
IUUC-Ssc-115392	Sus scrofa	74.92	1.00e-144	505.00
IUUC-Tgu-117340	Taeniopygia guttata	64.51	1.00e-159	555.00
IUUC-Tru-117577	Takifugu rubripes	57.96	2.00e-145	508.00
IUUC-Tsy-119404	Tarsius syrichta	61.04	5.00e-154	536.00
IUUC-Tni-120713	Tetraodon nigroviridis	68.62	1.00e-132	466.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence