iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095577

Ensembl Protein ID

PP1S330_37V6.1

UniProt Accession

A9TJ06; A9TJ06_PHYPA

Genbank Protein ID

EDQ56587.1

Protein Name

Chlorophyll a-b binding protein, chloroplastic

Genbank Nucleotide ID

DS545130

Gene Name

PHYPADRAFT_222728

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S330_37V6	PP1S330_37V6.1	PP1S330_37V6.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	28.00	2.80e-01	33.10	IUUC-Mmu-063358

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Physcomitrella patens

Functional Description
(View)

The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.

Protein Sequence
(Fasta)

MASAVCASSS VAVVAGPSTS KVVSNVGPAR TSLLAGRARR TTRIATSPQV DPPVSNEPAL 60
PNNDRPLWFP GSKAPEWLDG SLPGDFGFDP LGLGSDPELL KWFVQAELVH CRWAMLGAAG 120

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Nucleotide Sequence
(Fasta)

TTCCCTCCTC GCAGGCTCTA AGTTGTCCAT GCCCTCCTAC CTCCTTCGTC AGTCCGTGCT 60
TCCTCAAATC CCTTGCTTCT GCCACCAATC ACCTTCCCGG CTGCCACCTT CCTGTTTACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0148--Chlorophyll
KW-0150--Chloroplast
KW-0157--Chromophore
KW-0181--Complete proteome
KW-0472--Membrane
KW-0602--Photosynthesis
KW-0603--Photosystem I
KW-0604--Photosystem II
KW-0934--Plastid
KW-1185--Reference proteome
KW-0793--Thylakoid
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001344--Chloro_AB-bd_pln
IPR022796--Chloroa_b-bind
IPR023329--Chlorophyll_a/b-bd_dom

Pfam

PF00504--Chloroa_b-bind

Gene Ontology

GO:0009941--C:chloroplast envelope
GO:0009535--C:chloroplast thylakoid membrane
GO:0016021--C:integral component of membrane
GO:0009522--C:photosystem I
GO:0009523--C:photosystem II
GO:0010287--C:plastoglobule
GO:0016168--F:chlorophyll binding
GO:0031409--F:pigment binding
GO:0009768--P:photosynthesis, light harvesting in photosystem I
GO:0018298--P:protein-chromophore linkage
GO:0009416--P:response to light stimulus

KEGG

ppp:PHYPADRAFT_222728

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cja-019020	Callithrix jacchus	26.00	4.30e-01	29.60
IUUC-Cfa-020137	Canis familiaris	26.60	5.70e-01	29.30
IUUC-Cpo-021856	Cavia porcellus	26.00	4.80e-01	29.30
IUUC-Csa-024137	Chlorocebus sabaeus	26.00	3.10e-01	30.00
IUUC-Dno-028994	Dasypus novemcinctus	26.00	5.10e-01	29.30
IUUC-Eca-033730	Equus caballus	26.60	9.80e-01	28.50
IUUC-Fca-035714	Felis catus	26.00	4.90e-01	29.30
IUUC-Ggo-045159	Gorilla gorilla	26.00	4.20e-01	29.60
IUUC-Hsa-045863	Homo sapiens	26.00	4.20e-01	29.60
IUUC-Itr-048804	Ictidomys tridecemlineatus	26.60	5.70e-01	29.30
IUUC-Laf-054362	Loxodonta africana	26.00	4.90e-01	29.30
IUUC-Mcc-055382	Macaca mulatta	26.00	2.90e-01	30.00
IUUC-Mmr-061383	Microcebus murinus	26.00	4.40e-01	29.60
IUUC-Mmu-063358	Mus musculus	28.00	2.10e-02	33.90
IUUC-Mpu-066845	Mustela putorius furo	26.00	4.80e-01	29.30
IUUC-Mlu-067006	Myotis lucifugus	26.00	3.40e-01	30.00
IUUC-Nle-069386	Nomascus leucogenys	26.00	4.40e-01	29.60
IUUC-Opr-070396	Ochotona princeps	27.00	3.10e-02	33.50
IUUC-Ocu-074054	Oryctolagus cuniculus	26.00	7.00e-01	28.90
IUUC-Oga-088549	Otolemur garnettii	26.00	4.00e-01	29.60
IUUC-Oar-089776	Ovis aries	25.74	5.20e-01	29.30
IUUC-Ptr-090774	Pan troglodytes	26.00	4.20e-01	29.60
IUUC-Pan-092510	Papio anubis	26.00	2.70e-01	30.40
IUUC-Pab-098616	Pongo abelii	26.00	3.80e-01	29.60
IUUC-Pca-101105	Procavia capensis	27.96	1.50e-01	30.80
IUUC-Rno-105070	Rattus norvegicus	27.00	9.70e-02	31.60
IUUC-Smo-108823	Selaginella moellendorffii	36.68	2.00e-30	124.00
IUUC-Sbi-114200	Sorghum bicolor	64.71	3.00e-73	267.00
IUUC-Ssc-115559	Sus scrofa	26.00	4.50e-01	29.60

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence