iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndex	HINT	Mentha
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	35.59	6.60e-01	33.10	IUUC-Hsa-046557

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MATFTHQTPQ THFLSRLPLR AKPRHFSARV KMSLQESAPS LAVVGVTGAV GQEFLSVLSD 60
RDFPYSSIKM LASKRSAGKR VAFDGHEYTV EELTADSFNG VDIALFSAGG SISKEFGPLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAGAAAGTT GTGTGAATAT ACTCAATCTG GTGAATGAGC AGTTTCAAAC ATCATGCTGT 60
TTCTGTATCT TAAATTAAAC AATCTTGCTG TTTTGAATTT TGAAGATGTT GGTCAATTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR012080--Asp_semialdehyde_DH
IPR005986--Asp_semialdehyde_DH_beta
IPR016040--NAD(P)-bd_dom
IPR000534--Semialdehyde_DH_NAD-bd
IPR012280--Semialdhyde_DH_dimer_dom

Pfam

PF01118--Semialdhyde_dh
PF02774--Semialdhyde_dhC

SMART

SM00859--Semialdhyde_dh

Gene Ontology

GO:0009507--C:chloroplast
GO:0009570--C:chloroplast stroma
GO:0005739--C:mitochondrion
GO:0009536--C:plastid
GO:0004073--F:aspartate-semialdehyde dehydrogenase activity
GO:0003942--F:N-acetyl-gamma-glutamyl-phosphate reductase activity
GO:0051287--F:NAD binding
GO:0050661--F:NADP binding
GO:0009097--P:isoleucine biosynthetic process
GO:0009089--P:lysine biosynthetic process via diaminopimelate
GO:0009086--P:methionine biosynthetic process
GO:0009088--P:threonine biosynthetic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002075	Ailuropoda melanoleuca	35.59	9.00e-03	32.70
IUUC-Bta-013183	Bos taurus	35.59	8.00e-03	33.10
IUUC-Bra-017915	Brassica rapa	95.64	0.00e+00	662.00
IUUC-Cja-018862	Callithrix jacchus	37.29	8.00e-03	33.10
IUUC-Cfa-020226	Canis familiaris	35.59	9.00e-03	32.70
IUUC-Cpo-022414	Cavia porcellus	35.59	8.00e-03	32.70
IUUC-Csa-023758	Chlorocebus sabaeus	35.59	1.10e-02	32.30
IUUC-Dno-029565	Dasypus novemcinctus	35.59	1.20e-02	33.10
IUUC-Dor-030447	Dipodomys ordii	35.59	8.00e-03	32.30
IUUC-Ete-033023	Echinops telfairi	35.59	6.00e-03	33.50
IUUC-Fca-036469	Felis catus	35.59	1.00e-02	32.70
IUUC-Ggo-045341	Gorilla gorilla	35.59	1.10e-02	32.30
IUUC-Hsa-046557	Homo sapiens	35.59	8.00e-03	33.10
IUUC-Itr-049013	Ictidomys tridecemlineatus	35.59	1.10e-02	32.30
IUUC-Laf-053560	Loxodonta africana	35.59	1.00e-02	32.70
IUUC-Mcc-055890	Macaca mulatta	35.59	1.10e-02	32.30
IUUC-Mmr-061387	Microcebus murinus	35.59	8.00e-03	32.70
IUUC-Mdo-062383	Monodelphis domestica	35.59	1.10e-02	32.30
IUUC-Mmu-063982	Mus musculus	35.59	1.10e-02	32.30
IUUC-Mpu-066459	Mustela putorius furo	35.59	1.00e-02	32.70
IUUC-Mlu-068040	Myotis lucifugus	35.59	9.00e-03	32.70
IUUC-Nle-069016	Nomascus leucogenys	35.59	1.10e-02	32.30
IUUC-Opr-071087	Ochotona princeps	35.59	9.00e-03	32.70
IUUC-Ocu-074539	Oryctolagus cuniculus	33.90	1.20e-01	29.30
IUUC-Olu-087734	Ostreococcus lucimarinus	27.91	8.00e-04	37.00
IUUC-Oar-089932	Ovis aries	35.59	9.00e-03	32.70
IUUC-Ptr-091037	Pan troglodytes	35.59	1.10e-02	32.30
IUUC-Pan-092767	Papio anubis	35.59	1.00e-02	32.30
IUUC-Pab-098319	Pongo abelii	35.59	9.00e-03	32.70
IUUC-Pca-101117	Procavia capensis	35.59	9.00e-03	32.70
IUUC-Rno-105913	Rattus norvegicus	35.59	2.10e-02	32.00
IUUC-Sha-106500	Sarcophilus harrisii	35.59	1.40e-02	32.00
IUUC-Ssc-115252	Sus scrofa	35.59	7.00e-03	33.10
IUUC-Tsy-119335	Tarsius syrichta	33.90	1.00e-02	32.00
IUUC-Tbe-127915	Tupaia belangeri	35.59	9.00e-03	32.70
IUUC-Ttr-128372	Tursiops truncatus	35.59	7.00e-03	33.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence