iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132244

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin protein ligase E3 component n-recognin 1

Genbank Nucleotide ID

AAMC01110626

Gene Name

ubr1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000000961.3	ENSXETT00000002109.3	ENSXETP00000002109.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/N-recognin/UBR-box	2.50e-22	79.4	69	139

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/N-recognin/UBR-box

   S: 2    lCgrvfkvgetiyeCrtCsvdetlvlCteCfa.kvvHkdHeyklkksggggfCdCGdteAwedgskCkkll 71
           lCgrvf+ get+y+Cr+C +d+ +vlC++Cf+    H + ++k++ s gggfCdCGdteAw++g++Ck ++
   Q: 69   LCGRVFRGGETTYSCRDCVIDPCCVLCMDCFHlGLAHAQYNLKMHSSMGGGFCDCGDTEAWKTGPYCKIHE 139
           7******************************73679********************************996 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

VNALDFASAF HQHVAKHVPQ IYTDELQPQV EKQEELAQKL ILTPLEWCLF REDPNVFKEK 60
LRHSAAPPLC GRVFRGGETT YSCRDCVIDP CCVLCMDCFH LGLAHAQYNL KMHSSMGGGF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCAACGCTT TGGATTTTGC CTCTGCCTTT CACCAACACG TGGCAAAGCA TGTCCCCCAG 60
ATTTATACAG ATGAGCTGCA GCCACAAGTG GAGAAGCAAG AGGAGCTGGC ACAGAAACTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003769--ClpS_core
IPR014719--Ribosomal_L7/12_C/ClpS-like
IPR011991--WHTH_DNA-bd_dom
IPR013083--Znf_RING/FYVE/PHD
IPR003126--Znf_UBR

PROSITE

PS51157--ZF_UBR

Pfam

PF02617--ClpS
PF02207--zf-UBR

SMART

SM00396--ZnF_UBR1

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000151--C:ubiquitin ligase complex
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0071596--P:ubiquitin-dependent protein catabolic process via the N-end rule pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001354	Ailuropoda melanoleuca	60.98	0.00e+00	2105.00
IUUC-Apl-004160	Anas platyrhynchos	62.36	0.00e+00	2138.00
IUUC-Aca-004982	Anolis carolinensis	60.73	0.00e+00	2088.00
IUUC-Acl-008055	Aspergillus clavatus	23.44	1.00e-44	176.00
IUUC-Afu-008929	Aspergillus fumigatus	23.47	2.00e-47	186.00
IUUC-Ate-010550	Aspergillus terreus	23.13	7.00e-45	177.00
IUUC-Ame-011231	Astyanax mexicanus	51.71	0.00e+00	1645.00
IUUC-Bta-012347	Bos taurus	60.72	0.00e+00	2068.00
IUUC-Bci-013834	Botrytis cinerea	22.91	2.00e-37	152.00
IUUC-Cja-018911	Callithrix jacchus	59.33	0.00e+00	2035.00
IUUC-Cfa-020991	Canis familiaris	61.23	0.00e+00	2104.00
IUUC-Cpo-021448	Cavia porcellus	61.05	0.00e+00	2096.00
IUUC-Cre-022930	Chlamydomonas reinhardtii	38.46	1.10e-01	28.50
IUUC-Csa-024255	Chlorocebus sabaeus	60.08	0.00e+00	1675.00
IUUC-Cho-024550	Choloepus hoffmanni	52.51	0.00e+00	1101.00
IUUC-Dno-029427	Dasypus novemcinctus	60.21	0.00e+00	2034.00
IUUC-Dor-031073	Dipodomys ordii	54.87	0.00e+00	850.00
IUUC-Ete-032318	Echinops telfairi	49.34	0.00e+00	771.00
IUUC-Eca-033348	Equus caballus	61.13	0.00e+00	1971.00
IUUC-Eeu-034664	Erinaceus europaeus	57.84	0.00e+00	1258.00
IUUC-Fca-035604	Felis catus	60.20	0.00e+00	989.00
IUUC-Fal-037333	Ficedula albicollis	62.02	0.00e+00	2111.00
IUUC-Gmo-039363	Gadus morhua	50.03	0.00e+00	1441.00
IUUC-Gga-040486	Gallus gallus	61.74	0.00e+00	2070.00
IUUC-Gac-041985	Gasterosteus aculeatus	52.01	0.00e+00	1516.00
IUUC-Ggo-044704	Gorilla gorilla	56.18	0.00e+00	1561.00
IUUC-Hsa-046753	Homo sapiens	61.38	0.00e+00	2095.00
IUUC-Itr-048410	Ictidomys tridecemlineatus	60.92	0.00e+00	2086.00
IUUC-Lch-049904	Latimeria chalumnae	54.22	0.00e+00	1823.00
IUUC-Loc-052624	Lepisosteus oculatus	54.88	0.00e+00	1765.00
IUUC-Laf-053857	Loxodonta africana	60.50	0.00e+00	2087.00
IUUC-Mcc-054873	Macaca mulatta	61.19	0.00e+00	2073.00
IUUC-Meu-056858	Macropus eugenii	52.59	0.00e+00	713.00
IUUC-Mga-059917	Meleagris gallopavo	62.04	0.00e+00	2154.00
IUUC-Mmr-061128	Microcebus murinus	58.09	0.00e+00	1907.00
IUUC-Mdo-062306	Monodelphis domestica	61.25	0.00e+00	2108.00
IUUC-Mmu-063389	Mus musculus	61.10	0.00e+00	2086.00
IUUC-Mpu-065983	Mustela putorius furo	61.06	0.00e+00	2105.00
IUUC-Mlu-068013	Myotis lucifugus	59.42	0.00e+00	2029.00
IUUC-Nle-070031	Nomascus leucogenys	61.56	0.00e+00	2103.00
IUUC-Ont-072035	Oreochromis niloticus	51.82	0.00e+00	1677.00
IUUC-Ocu-074930	Oryctolagus cuniculus	60.46	0.00e+00	2053.00
IUUC-Ola-086683	Oryzias latipes	51.79	0.00e+00	1657.00
IUUC-Oga-088017	Otolemur garnettii	58.04	0.00e+00	1958.00
IUUC-Oar-089557	Ovis aries	60.69	0.00e+00	2072.00
IUUC-Ptr-091366	Pan troglodytes	60.53	0.00e+00	2068.00
IUUC-Pan-092184	Papio anubis	61.19	0.00e+00	2072.00
IUUC-Psi-093720	Pelodiscus sinensis	61.73	0.00e+00	2068.00
IUUC-Pfo-097124	Poecilia formosa	51.78	0.00e+00	1675.00
IUUC-Pab-098586	Pongo abelii	61.27	0.00e+00	2090.00
IUUC-Pca-100673	Procavia capensis	55.18	0.00e+00	1068.00
IUUC-Pva-102724	Pteropus vampyrus	59.41	0.00e+00	1442.00
IUUC-Pte-104174	Pyrenophora teres	21.83	3.00e-35	144.00
IUUC-Pyt-104431	Pyrenophora triticirepentis	21.64	7.00e-35	144.00
IUUC-Rno-105474	Rattus norvegicus	58.93	0.00e+00	1492.00
IUUC-Sha-106993	Sarcophilus harrisii	60.81	0.00e+00	2116.00
IUUC-Sar-113447	Sorex araneus	58.25	0.00e+00	1340.00
IUUC-Ssc-115768	Sus scrofa	58.07	0.00e+00	1856.00
IUUC-Tgu-116949	Taeniopygia guttata	60.51	0.00e+00	2022.00
IUUC-Tru-117782	Takifugu rubripes	50.88	0.00e+00	1650.00
IUUC-Tsy-119177	Tarsius syrichta	56.90	0.00e+00	1210.00
IUUC-Tni-120884	Tetraodon nigroviridis	47.67	0.00e+00	1484.00
IUUC-Tbe-128088	Tupaia belangeri	54.27	0.00e+00	793.00
IUUC-Ttr-129062	Tursiops truncatus	56.57	0.00e+00	1891.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence