iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099801

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin carboxyl-terminal hydrolase family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_798230; POPTR_0001s45310g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s45310	POPTR_0001s45310.1	POPTR_0001s45310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.80e-109	367.2	324	914

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDa 92
           Gl+N+gNtC+mNS+LQcL+++p+l e++l+ ++e++n +np +++gel+ ++ +l+++lw+s ++av+pr ++ +l+ +a++fsgy+q+D+
   Q: 324  GLQNMGNTCFMNSALQCLVHTPQLVEYFLQDYSEEINTQNPLGMHGELALAFGDLLRKLWSSGRTAVAPRVFKGKLALFAPQFSGYNQHDS 414
           9****************************************************************************************** PP
   S: 93   qEflaflldqleeelkkeknkpkeeeee...edkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgke 180
           qE+laflld+l+e+l++ k+kp+ e+++   e ++e  de ++++k +n+s+i+d+ qgq+ks+++c+ c ++s++++pf++lslp+p+  
   Q: 415  QELLAFLLDGLHEDLNRVKQKPYIEMKDwsgEPDEEIADECWRNHKARNDSVIVDVCQGQYKSTLVCPICSKISVTFDPFMYLSLPLPSTV 505
           ***********************99987222445666777************************************************999 PP
   S: 181  etkke...................................................................................... 185
           +++++                                                                                      
   Q: 506  TRSMTvtvfygdgsglpmpytisvlkhgncrdlsqalgtacclkggeslllaevfdhkiyrllenpfeplvsikdedrivayrfsgkgtgr 596
           988889************************************************************************************* PP
   S: 186  ........................................................................................... 185
                                                                                                      
   Q: 597  rkleiihrdnfmgnvgksfgtplitymdddsptgadiylaackllsplkracsptmahsgkengllseanaetssscngqcepprdqsmgd 687
           ******************************************************************************************* PP
   S: 186  .................................................................................slqdcLesft 195
                                                                                            sl +cLe+f 
   Q: 688  teledtssqelsfqlfltddryssckpifkdsvinsgnqikvvvewtekeqklydssylkdlpevyhktgyttkktrqeavSLFSCLEAFL 778
           ******************************************************************************************* PP
   S: 196  keeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.LdlspfctspeekqkekkkYeLiavvv 285
           +ee l  ++++yc++ck++++a+kkl+l+ lP++L++hLkRfs+s+  + ++k+++ v+fp++ Ldls+++ +++     + +YeL+a+ +
   Q: 779  TEEPLGPDDMWYCPSCKEHRQATKKLDLWMLPDILVFHLKRFSYSR--YLKNKLDTFVDFPIHnLDLSKYVKKNDGH---SFTYELFAISN 864
           ******************************************9977..6999*******************996654...8********** PP
   S: 286  HsGslssGHYvayvknekgk.WllfdDskVtevkeeevleetgstaYvlfYkr 337
           H+G+l++GHY+a++k  +++ W+ fdDs+V++v+e+++++   s aYvlfY+r
   Q: 865  HYGGLGGGHYTAFAKLIDENrWYSFDDSRVSPVNEDDIKT---SAAYVLFYRR 914
           ****************65555*******************...********98 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTMIDSSCLM ENGGGGGGGG SCLTCTPEEE KQIVEELSRE AERDLKEGNL YFVVSSRWFS 60
KWERYVGQGF VDNLDNGKSL ESQDLDAERP GPIDNSDIIE GGSGNEGDEL ELVRALLEGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGATGGTTGA AAAGACACCC CCCTCTCTCT CTCCAATTTT ATCTCTCTAA ATTCTTGCTA 60
TTCATAAAGT CCTCCATAAT CTCTTCATAA TAACAAATCA AACCCATTTA TCTAGGGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR006615--Pept_C19_DUSP
IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS51283--DUSP
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF06337--DUSP
PF00443--UCH

SMART

SM00695--DUSP

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s45310g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001852	Ailuropoda melanoleuca	36.81	2.00e-151	529.00
IUUC-Apl-003249	Anas platyrhynchos	38.35	8.00e-101	361.00
IUUC-Aca-004459	Anolis carolinensis	35.09	3.00e-124	439.00
IUUC-Aly-006044	Arabidopsis lyrata	59.83	0.00e+00	1069.00
IUUC-Ath-007288	Arabidopsis thaliana	59.91	0.00e+00	1086.00
IUUC-Ago-007911	Ashbya gossypii	43.55	9.00e-61	228.00
IUUC-Bta-013128	Bos taurus	36.88	1.00e-152	533.00
IUUC-Bol-015244	Brassica oleracea	60.96	0.00e+00	1089.00
IUUC-Bra-016885	Brassica rapa	61.07	0.00e+00	1096.00
IUUC-Cja-019222	Callithrix jacchus	36.58	8.00e-151	527.00
IUUC-Cfa-020035	Canis familiaris	37.09	9.00e-152	530.00
IUUC-Cpo-022144	Cavia porcellus	36.49	9.00e-140	490.00
IUUC-Csa-023882	Chlorocebus sabaeus	36.60	1.00e-150	526.00
IUUC-Cme-027338	Cyanidioschyzon merolae	52.86	1.00e-64	241.00
IUUC-Dor-030384	Dipodomys ordii	34.97	5.00e-133	468.00
IUUC-Dse-031432	Dothistroma septosporum	41.86	7.00e-52	199.00
IUUC-Dme-032094	Drosophila melanogaster	28.46	6.00e-56	213.00
IUUC-Eca-034340	Equus caballus	36.66	7.00e-149	520.00
IUUC-Eeu-034488	Erinaceus europaeus	35.62	3.00e-87	316.00
IUUC-Fca-035373	Felis catus	36.56	1.00e-142	500.00
IUUC-Fal-037634	Ficedula albicollis	38.73	2.00e-153	536.00
IUUC-Gga-040729	Gallus gallus	37.78	5.00e-150	524.00
IUUC-Gac-042631	Gasterosteus aculeatus	37.89	3.00e-146	512.00
IUUC-Ggo-045002	Gorilla gorilla	36.66	4.00e-149	521.00
IUUC-Hsa-046052	Homo sapiens	36.60	1.00e-150	526.00
IUUC-Itr-048306	Ictidomys tridecemlineatus	37.22	2.00e-152	532.00
IUUC-Lch-050107	Latimeria chalumnae	36.64	5.00e-151	528.00
IUUC-Loc-052105	Lepisosteus oculatus	36.42	1.00e-141	497.00
IUUC-Mcc-055586	Macaca mulatta	36.60	1.00e-150	526.00
IUUC-Meu-056742	Macropus eugenii	39.68	2.00e-110	393.00
IUUC-Mga-060162	Meleagris gallopavo	38.35	5.00e-103	368.00
IUUC-Mmr-061105	Microcebus murinus	36.71	4.00e-151	528.00
IUUC-Mdo-061848	Monodelphis domestica	37.15	2.00e-143	503.00
IUUC-Mac-064956	Musa acuminata	58.40	0.00e+00	1045.00
IUUC-Mpu-066920	Mustela putorius furo	36.98	1.00e-141	496.00
IUUC-Nle-069874	Nomascus leucogenys	36.65	1.00e-150	526.00
IUUC-Ont-071834	Oreochromis niloticus	38.98	3.00e-106	379.00
IUUC-Oan-073363	Ornithorhynchus anatinus	42.77	2.00e-122	432.00
IUUC-Ocu-074573	Oryctolagus cuniculus	36.65	6.00e-151	528.00
IUUC-Ola-086553	Oryzias latipes	37.69	3.00e-106	379.00
IUUC-Oga-089022	Otolemur garnettii	37.13	1.00e-152	533.00
IUUC-Oar-090439	Ovis aries	36.36	2.00e-141	496.00
IUUC-Ptr-091319	Pan troglodytes	36.88	5.00e-153	534.00
IUUC-Pan-091968	Papio anubis	36.60	1.00e-150	526.00
IUUC-Psi-093942	Pelodiscus sinensis	37.46	3.00e-144	505.00
IUUC-Pma-094533	Petromyzon marinus	35.90	1.00e-147	517.00
IUUC-Pno-094890	Phaeosphaeria nodorum	39.92	2.00e-48	187.00
IUUC-Pfo-097060	Poecilia formosa	39.45	1.00e-108	387.00
IUUC-Pab-098664	Pongo abelii	36.60	1.00e-150	526.00
IUUC-Ppe-101587	Prunus persica	66.55	0.00e+00	1139.00
IUUC-Pva-102394	Pteropus vampyrus	35.76	3.00e-142	498.00
IUUC-Pgr-103546	Puccinia graminis	41.90	7.00e-54	206.00
IUUC-Ptt-103847	Puccinia triticina	42.12	1.00e-52	201.00
IUUC-Sce-106170	Saccharomyces cerevisiae	44.06	2.00e-55	211.00
IUUC-Sha-106937	Sarcophilus harrisii	42.36	2.00e-124	439.00
IUUC-Sar-113498	Sorex araneus	37.09	2.00e-151	529.00
IUUC-Ssc-115285	Sus scrofa	36.71	2.00e-151	529.00
IUUC-Tgu-117267	Taeniopygia guttata	39.14	2.00e-154	539.00
IUUC-Tru-118634	Takifugu rubripes	38.60	8.00e-101	361.00
IUUC-Tre-121888	Trichoderma reesei	43.46	2.00e-56	214.00
IUUC-Tvi-122422	Trichoderma virens	43.58	3.00e-56	214.00
IUUC-Vpa-130469	Vicugna pacos	36.73	9.00e-148	517.00
IUUC-Xma-133550	Xiphophorus maculatus	38.23	3.00e-104	372.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence