iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-117561

Ensembl Protein ID

ENSTRUP00000033883.1

UniProt Accession

H2UAB6; H2UAB6_TAKRU

Protein Name

Uncharacterized protein

Gene Name

kdm5ba; nelfcd

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000013308.1	ENSTRUT00000034005.1	ENSTRUP00000033879.1
ENSTRUG00000013308.1	ENSTRUT00000034006.1	ENSTRUP00000033880.1
ENSTRUG00000013308.1	ENSTRUT00000034007.1	ENSTRUP00000033881.1
ENSTRUG00000013308.1	ENSTRUT00000034008.1	ENSTRUP00000033882.1
ENSTRUG00000013308.1	ENSTRUT00000034009.1	ENSTRUP00000033883.1
ENSTRUG00000013308.1	ENSTRUT00000034010.1	ENSTRUP00000033884.1
ENSTRUG00000013308.1	ENSTRUT00000034011.1	ENSTRUP00000033885.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.60e-18	67.2	319	365

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +ClvCg g++++  l+ C+ C++ +H  Cl ++   ++p+ + w CpkC 
   Q: 319  MCLVCGCGTAED-RLLLCDGCDDSYHTFCLIPP-LHDVPKGD-WRCPKCL 365
           9******99987.6*******************.*******7.******5 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

LNEFIPPPEC PVFEPSWEEF ADPFAYIKKI RPIAEKTGIC KIRPPPDWQP PFACDVDRLK 60
FTPRIQRLNE LEAQTRVKLN FLDQIAKFWE LQGCTLKIPH VERKILDLYQ LNRLVNEEGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAAATGAGT TCATTCCCCC TCCGGAGTGC CCTGTTTTTG AGCCCAGCTG GGAGGAATTT 60
GCCGACCCGT TTGCATACAT CAAGAAAATA CGACCCATTG CAGAGAAAAC TGGCATCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001963	Ailuropoda melanoleuca	62.16	0.00e+00	1650.00
IUUC-Apl-003770	Anas platyrhynchos	65.05	0.00e+00	1623.00
IUUC-Aca-004867	Anolis carolinensis	59.46	0.00e+00	1795.00
IUUC-Ame-010620	Astyanax mexicanus	58.94	0.00e+00	1776.00
IUUC-Bta-012733	Bos taurus	58.58	0.00e+00	1695.00
IUUC-Cja-019050	Callithrix jacchus	62.85	0.00e+00	1720.00
IUUC-Cfa-021015	Canis familiaris	62.10	0.00e+00	1646.00
IUUC-Cpo-022340	Cavia porcellus	62.46	0.00e+00	1642.00
IUUC-Csa-023441	Chlorocebus sabaeus	63.15	0.00e+00	1724.00
IUUC-Cho-024823	Choloepus hoffmanni	68.20	0.00e+00	1234.00
IUUC-Dre-027707	Danio rerio	59.32	0.00e+00	1724.00
IUUC-Dno-028978	Dasypus novemcinctus	62.91	0.00e+00	1725.00
IUUC-Dor-030854	Dipodomys ordii	54.17	0.00e+00	1041.00
IUUC-Ete-032760	Echinops telfairi	57.75	0.00e+00	1136.00
IUUC-Eca-034370	Equus caballus	61.58	0.00e+00	1624.00
IUUC-Eeu-035012	Erinaceus europaeus	59.42	0.00e+00	1182.00
IUUC-Fca-035494	Felis catus	62.88	0.00e+00	1650.00
IUUC-Fal-037631	Ficedula albicollis	61.78	0.00e+00	1664.00
IUUC-Gmo-039522	Gadus morhua	54.99	0.00e+00	1563.00
IUUC-Gga-040802	Gallus gallus	61.45	0.00e+00	1737.00
IUUC-Gac-041461	Gasterosteus aculeatus	78.21	0.00e+00	2377.00
IUUC-Hsa-045888	Homo sapiens	63.80	0.00e+00	1758.00
IUUC-Itr-048297	Ictidomys tridecemlineatus	63.44	0.00e+00	1719.00
IUUC-Lch-050483	Latimeria chalumnae	55.14	0.00e+00	1645.00
IUUC-Lpe-051537	Leersia perrieri	39.29	7.00e-88	319.00
IUUC-Loc-052550	Lepisosteus oculatus	64.21	0.00e+00	1861.00
IUUC-Laf-053761	Loxodonta africana	61.66	0.00e+00	1621.00
IUUC-Mcc-055505	Macaca mulatta	63.80	0.00e+00	1758.00
IUUC-Mga-059358	Meleagris gallopavo	59.25	0.00e+00	1707.00
IUUC-Mmr-060863	Microcebus murinus	62.67	0.00e+00	1696.00
IUUC-Mdo-061957	Monodelphis domestica	62.41	0.00e+00	1757.00
IUUC-Mmu-063944	Mus musculus	61.73	0.00e+00	1690.00
IUUC-Mpu-066719	Mustela putorius furo	63.05	0.00e+00	1722.00
IUUC-Mlu-067366	Myotis lucifugus	57.29	0.00e+00	1679.00
IUUC-Nle-069256	Nomascus leucogenys	62.85	0.00e+00	1718.00
IUUC-Ont-071701	Oreochromis niloticus	77.60	0.00e+00	2388.00
IUUC-Oan-073568	Ornithorhynchus anatinus	60.76	0.00e+00	1822.00
IUUC-Ocu-073961	Oryctolagus cuniculus	62.44	0.00e+00	1714.00
IUUC-Ola-086542	Oryzias latipes	78.25	0.00e+00	1836.00
IUUC-Oga-088501	Otolemur garnettii	58.15	0.00e+00	1328.00
IUUC-Oar-090162	Ovis aries	58.48	0.00e+00	1697.00
IUUC-Ptr-090816	Pan troglodytes	63.80	0.00e+00	1762.00
IUUC-Pan-092764	Papio anubis	63.15	0.00e+00	1725.00
IUUC-Psi-093918	Pelodiscus sinensis	59.08	0.00e+00	1417.00
IUUC-Pfo-096777	Poecilia formosa	78.51	0.00e+00	2394.00
IUUC-Pab-097854	Pongo abelii	63.09	0.00e+00	1509.00
IUUC-Ppe-101504	Prunus persica	31.63	8.00e-102	365.00
IUUC-Pva-103035	Pteropus vampyrus	62.07	0.00e+00	1335.00
IUUC-Pgr-103434	Puccinia graminis	34.76	2.00e-29	122.00
IUUC-Rno-105574	Rattus norvegicus	59.74	0.00e+00	1741.00
IUUC-Sar-113477	Sorex araneus	61.09	0.00e+00	1621.00
IUUC-Ssc-116132	Sus scrofa	64.80	0.00e+00	1666.00
IUUC-Tgu-117452	Taeniopygia guttata	61.97	0.00e+00	1637.00
IUUC-Tsy-119271	Tarsius syrichta	62.61	0.00e+00	1262.00
IUUC-Tni-119650	Tetraodon nigroviridis	87.24	0.00e+00	2580.00
IUUC-Tca-121478	Theobroma cacao	33.25	4.00e-107	383.00
IUUC-Ttr-128546	Tursiops truncatus	61.83	0.00e+00	1413.00
IUUC-Vvi-131071	Vitis vinifera	33.39	4.00e-84	306.00
IUUC-Xtr-132008	Xenopus tropicalis	57.75	0.00e+00	1689.00
IUUC-Xma-133598	Xiphophorus maculatus	78.08	0.00e+00	2373.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence