iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074291

Ensembl Protein ID

ENSOCUP00000002003.3

UniProt Accession

G1SHA7; G1SHA7_RABIT

Genbank Protein ID

ENSOCUP00000002003

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02067680

Gene Name

PATZ1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000002323.3	ENSOCUT00000002322.3	ENSOCUP00000002003.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	6.10e-14	52.2	41	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 1    aDvilvvggeeffahkivLaasSsvFyalflmelees......................ksklmveikdvqpevfrallkFlYtgkl 65
           +Dv+l vg+e f+ah++vLaa+S++F++ f+ +l ++                        + + e++ ++ +vf ++l+F Yt+++
   Q: 41   CDVLLRVGDESFPAHRAVLAACSEYFESVFSAQLGDGgaadggpadvggaaaapgggagG-SRELEMHTISSKVFGDILDFAYTSRI 126
           8**********************************999********************54.8899999****************997 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MERVNDASCG PSGCYTYQVS RHSTEMLHNL NQQRKNGGRF CDVLLRVGDE SFPAHRAVLA 60
ACSEYFESVF SAQLGDGGAA DGGPADVGGA AAAPGGGAGG SRELEMHTIS SKVFGDILDF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCACTAACG AAATAATCCA GTTACACGAA TCGCGAGAGT TTGATAGAGA TATTGTATAC 60
AAATTGACTT TTCTTCCTCC TCCCCACCCC CTCCTCCTCG GCGTCCTCCT CCGCCCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR000637--HMGI/Y_DNA-bd_CS
IPR004039--Rubredoxin-type_fold
IPR011333--SKP1/BTB/POZ
IPR029037--YfgJ-like
IPR013087--Znf_C2H2_type

PROSITE

PS50097--BTB
PS00354--HMGI_Y
PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF00651--BTB

SMART

SM00225--BTB
SM00355--ZnF_C2H2

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0003682--F:chromatin binding
GO:0046872--F:metal ion binding
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077--F:transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0008584--P:male gonad development
GO:0007283--P:spermatogenesis
GO:0030217--P:T cell differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001393	Ailuropoda melanoleuca	95.99	0.00e+00	935.00
IUUC-Acl-008012	Aspergillus clavatus	36.11	2.00e-04	36.60
IUUC-Ame-010861	Astyanax mexicanus	60.78	3.00e-160	558.00
IUUC-Bta-012647	Bos taurus	96.18	0.00e+00	935.00
IUUC-Cja-019987	Callithrix jacchus	95.25	0.00e+00	903.00
IUUC-Cfa-020091	Canis familiaris	96.18	0.00e+00	935.00
IUUC-Cpo-021731	Cavia porcellus	94.85	0.00e+00	922.00
IUUC-Csa-023323	Chlorocebus sabaeus	99.07	0.00e+00	1009.00
IUUC-Cho-024339	Choloepus hoffmanni	97.48	2.00e-104	373.00
IUUC-Dre-028776	Danio rerio	61.14	2.00e-165	575.00
IUUC-Dno-028988	Dasypus novemcinctus	95.42	0.00e+00	932.00
IUUC-Eca-034224	Equus caballus	99.20	0.00e+00	937.00
IUUC-Fca-035834	Felis catus	99.20	0.00e+00	931.00
IUUC-Gmo-038564	Gadus morhua	58.59	2.00e-158	552.00
IUUC-Gga-040923	Gallus gallus	83.83	0.00e+00	828.00
IUUC-Gac-042115	Gasterosteus aculeatus	60.04	5.00e-167	581.00
IUUC-Ggo-045483	Gorilla gorilla	96.18	0.00e+00	942.00
IUUC-Hsa-045831	Homo sapiens	95.99	0.00e+00	913.00
IUUC-Itr-048966	Ictidomys tridecemlineatus	95.80	0.00e+00	932.00
IUUC-Lch-050298	Latimeria chalumnae	72.33	0.00e+00	697.00
IUUC-Laf-053714	Loxodonta africana	95.42	0.00e+00	938.00
IUUC-Mcc-055844	Macaca mulatta	82.34	0.00e+00	753.00
IUUC-Mmr-061004	Microcebus murinus	91.86	0.00e+00	885.00
IUUC-Mdo-061816	Monodelphis domestica	88.31	0.00e+00	830.00
IUUC-Mmu-063774	Mus musculus	95.80	0.00e+00	932.00
IUUC-Mpu-066238	Mustela putorius furo	99.05	0.00e+00	982.00
IUUC-Mlu-068149	Myotis lucifugus	95.99	0.00e+00	934.00
IUUC-Opr-071017	Ochotona princeps	99.21	4.00e-151	528.00
IUUC-Ont-072352	Oreochromis niloticus	60.04	2.00e-172	599.00
IUUC-Oan-073423	Ornithorhynchus anatinus	88.78	0.00e+00	877.00
IUUC-Oga-088646	Otolemur garnettii	96.18	0.00e+00	941.00
IUUC-Oar-089847	Ovis aries	94.22	0.00e+00	870.00
IUUC-Ptr-091669	Pan troglodytes	96.18	0.00e+00	942.00
IUUC-Pfo-097307	Poecilia formosa	59.05	3.00e-161	561.00
IUUC-Pab-097693	Pongo abelii	95.99	0.00e+00	942.00
IUUC-Pca-100274	Procavia capensis	97.33	4.00e-65	242.00
IUUC-Pva-102261	Pteropus vampyrus	95.99	0.00e+00	935.00
IUUC-Rno-105339	Rattus norvegicus	99.00	0.00e+00	931.00
IUUC-Ssc-116429	Sus scrofa	98.80	0.00e+00	931.00
IUUC-Tgu-116916	Taeniopygia guttata	86.85	0.00e+00	755.00
IUUC-Tru-117811	Takifugu rubripes	60.19	5.00e-166	577.00
IUUC-Tni-120697	Tetraodon nigroviridis	58.24	2.00e-154	539.00
IUUC-Ttr-128276	Tursiops truncatus	95.99	0.00e+00	932.00
IUUC-Xtr-131778	Xenopus tropicalis	71.60	0.00e+00	667.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence