iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114751

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G358300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g040040	Sb03g040040.1	Sb03g040040.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Josephin	43.35	5.00e-35	145.00	IUUC-Mmu-063600
UBD/Alpha-Helix/UIM	43.35	5.00e-35	145.00	IUUC-Mmu-063600

Active Site

Position(s)	Description	Evidence
20	N/A	{ECO:0000256\|PROSITE-ProRule:PRU00331}
131		{ECO:0000256\|PROSITE-ProRule:PRU00331}
146		{ECO:0000256\|PROSITE-ProRule:PRU00331}

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEAPSNGGLL YHEVQEGKLC AVHCVNTALQ GPFFSEFDLA ALAADLDQRE RLVMLEGSRS 60
PGVANPAAGD FFAEGEGSHN VSLGGDFSIQ VLQKALEVWD LQVIPLDSPA AGSSLFDPEQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGGACACAC GCAAAAAGCA CTCGCACAGC TCCTCCGCGC CCCCTTTCCC CCGTCGGCCG 60
ATTTCCTCAA TCCAGCCTCG AATCTGTGAT ACGACGAGGC GACGGAGAGC CGAATCGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-1185--Reference proteome

Interpro

IPR033865--Ataxin-3
IPR006155--Josephin
IPR009068--S15_NS1_RNA-bd

PROSITE

PS50957--JOSEPHIN

Pfam

PF02099--Josephin

SMART

SM01246--Josephin

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination

KEGG

sbi:SORBI_03g040040

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002015	Ailuropoda melanoleuca	34.63	2.00e-34	138.00
IUUC-Atr-002735	Amborella trichopoda	82.46	5.00e-18	81.30
IUUC-Apl-003210	Anas platyrhynchos	42.86	1.00e-33	135.00
IUUC-Aca-005171	Anolis carolinensis	31.93	9.00e-25	106.00
IUUC-Aly-005625	Arabidopsis lyrata	74.29	2.00e-84	304.00
IUUC-Ath-007088	Arabidopsis thaliana	74.16	1.00e-84	305.00
IUUC-Ame-010715	Astyanax mexicanus	43.09	1.00e-35	142.00
IUUC-Bta-013538	Bos taurus	42.53	7.00e-35	140.00
IUUC-Bdi-015000	Brachypodium distachyon	75.91	1.00e-132	464.00
IUUC-Bol-015894	Brassica oleracea	74.16	2.00e-84	305.00
IUUC-Bra-018020	Brassica rapa	73.21	6.00e-84	303.00
IUUC-Cel-018121	Caenorhabditis elegans	36.21	1.00e-25	109.00
IUUC-Cja-018840	Callithrix jacchus	34.72	3.00e-36	145.00
IUUC-Cfa-021035	Canis familiaris	34.72	5.00e-37	147.00
IUUC-Cpo-021776	Cavia porcellus	35.16	1.00e-33	136.00
IUUC-Csa-023257	Chlorocebus sabaeus	41.38	1.00e-31	129.00
IUUC-Cho-024878	Choloepus hoffmanni	34.28	7.00e-34	136.00
IUUC-Cme-027158	Cyanidioschyzon merolae	33.11	3.00e-06	44.30
IUUC-Dre-027506	Danio rerio	41.13	5.00e-25	107.00
IUUC-Dno-029172	Dasypus novemcinctus	34.60	4.00e-35	140.00
IUUC-Dor-030900	Dipodomys ordii	35.25	3.00e-36	144.00
IUUC-Ete-033000	Echinops telfairi	30.36	9.00e-08	50.10
IUUC-Eca-034338	Equus caballus	34.28	2.00e-34	138.00
IUUC-Eeu-034585	Erinaceus europaeus	42.05	2.00e-19	88.20
IUUC-Fal-037525	Ficedula albicollis	42.20	4.00e-34	137.00
IUUC-Gmo-039718	Gadus morhua	34.93	3.00e-36	144.00
IUUC-Gga-040774	Gallus gallus	42.77	2.00e-35	142.00
IUUC-Gac-041671	Gasterosteus aculeatus	42.61	1.00e-30	125.00
IUUC-Gma-042801	Glycine max	59.09	2.00e-89	321.00
IUUC-Ggo-044759	Gorilla gorilla	33.18	3.00e-25	108.00
IUUC-Hsa-046591	Homo sapiens	42.77	2.00e-35	142.00
IUUC-Hvu-047492	Hordeum vulgare	74.77	1.00e-128	451.00
IUUC-Itr-048851	Ictidomys tridecemlineatus	27.56	8.00e-14	69.70
IUUC-Lch-049519	Latimeria chalumnae	30.99	1.00e-24	105.00
IUUC-Lpe-050819	Leersia perrieri	79.34	4.00e-141	493.00
IUUC-Loc-051816	Lepisosteus oculatus	36.80	6.00e-39	153.00
IUUC-Laf-053784	Loxodonta africana	35.14	2.00e-37	148.00
IUUC-Mcc-055283	Macaca mulatta	34.72	1.00e-36	146.00
IUUC-Meu-056589	Macropus eugenii	38.69	7.00e-29	120.00
IUUC-Mtr-058233	Medicago truncatula	58.81	1.00e-92	331.00
IUUC-Mla-059013	Melampsora laricipopulina	30.86	5.00e-11	61.20
IUUC-Mga-059301	Meleagris gallopavo	32.90	3.00e-36	144.00
IUUC-Mmr-061038	Microcebus murinus	34.72	7.00e-37	147.00
IUUC-Mdo-062927	Monodelphis domestica	42.20	2.00e-35	142.00
IUUC-Mmu-063600	Mus musculus	43.35	3.00e-36	145.00
IUUC-Mpu-065897	Mustela putorius furo	34.25	3.00e-33	135.00
IUUC-Mlu-067543	Myotis lucifugus	34.63	9.00e-35	140.00
IUUC-Nle-069430	Nomascus leucogenys	40.23	8.00e-31	126.00
IUUC-Opr-070550	Ochotona princeps	29.90	1.00e-22	99.40
IUUC-Ont-071723	Oreochromis niloticus	40.91	2.00e-31	128.00
IUUC-Oan-073569	Ornithorhynchus anatinus	34.08	3.00e-35	141.00
IUUC-Ocu-074632	Oryctolagus cuniculus	34.45	1.00e-33	135.00
IUUC-Oba-075288	Oryza barthii	79.10	4.00e-137	479.00
IUUC-Obr-076050	Oryza brachyantha	80.48	2.00e-141	494.00
IUUC-Ogl-077174	Oryza glaberrima	79.10	4.00e-137	479.00
IUUC-Ogu-078006	Oryza glumaepatula	78.81	4.00e-136	476.00
IUUC-Oin-079278	Oryza indica	76.81	1.00e-134	471.00
IUUC-Olo-080941	Oryza longistaminata	79.40	2.00e-137	481.00
IUUC-Ome-081172	Oryza meridionalis	79.40	5.00e-137	479.00
IUUC-Oni-082239	Oryza nivara	78.81	1.00e-136	478.00
IUUC-Opu-083939	Oryza punctata	78.81	4.00e-137	479.00
IUUC-Oru-084393	Oryza rufipogon	79.10	4.00e-137	479.00
IUUC-Osa-086080	Oryza sativa	78.81	3.00e-137	480.00
IUUC-Ola-087566	Oryzias latipes	40.34	4.00e-30	124.00
IUUC-Oga-088617	Otolemur garnettii	30.64	3.00e-15	74.70
IUUC-Oar-090052	Ovis aries	41.53	4.00e-34	137.00
IUUC-Ptr-091435	Pan troglodytes	34.72	1.00e-36	146.00
IUUC-Pan-092742	Papio anubis	41.38	5.00e-32	130.00
IUUC-Psi-093313	Pelodiscus sinensis	42.77	3.00e-35	141.00
IUUC-Pma-094374	Petromyzon marinus	44.44	6.00e-34	137.00
IUUC-Ppa-095601	Physcomitrella patens	57.71	9.00e-63	233.00
IUUC-Pfo-097327	Poecilia formosa	36.86	4.00e-32	130.00
IUUC-Pab-098435	Pongo abelii	40.80	2.00e-31	128.00
IUUC-Pca-101022	Procavia capensis	42.37	6.00e-18	84.00
IUUC-Ppe-101545	Prunus persica	68.20	3.00e-88	317.00
IUUC-Pva-102844	Pteropus vampyrus	35.07	1.00e-36	145.00
IUUC-Rno-104896	Rattus norvegicus	43.35	2.00e-36	145.00
IUUC-Sha-107106	Sarcophilus harrisii	42.77	8.00e-36	143.00
IUUC-Sit-110477	Setaria italica	89.79	3.00e-166	576.00
IUUC-Sly-111416	Solanum lycopersicum	71.43	4.00e-54	202.00
IUUC-Stu-112227	Solanum tuberosum	61.80	7.00e-61	225.00
IUUC-Sar-113534	Sorex araneus	34.52	2.00e-34	139.00
IUUC-Ssc-115274	Sus scrofa	34.38	9.00e-37	146.00
IUUC-Tgu-117426	Taeniopygia guttata	42.86	2.00e-33	135.00
IUUC-Tru-118059	Takifugu rubripes	42.61	4.00e-31	127.00
IUUC-Tsy-119448	Tarsius syrichta	34.68	2.00e-22	99.40
IUUC-Tni-120681	Tetraodon nigroviridis	41.86	7.00e-18	81.60
IUUC-Tca-121442	Theobroma cacao	64.31	1.00e-94	338.00
IUUC-Tae-123969	Triticum aestivum	76.87	5.00e-123	432.00
IUUC-Tbe-127638	Tupaia belangeri	38.10	4.00e-24	104.00
IUUC-Ttr-129288	Tursiops truncatus	30.31	2.00e-26	112.00
IUUC-Uma-129359	Ustilago maydis	33.50	5.00e-20	91.70
IUUC-Vpa-130788	Vicugna pacos	34.28	2.00e-34	139.00
IUUC-Vvi-131227	Vitis vinifera	66.54	8.00e-85	305.00
IUUC-Xtr-132147	Xenopus tropicalis	42.94	3.00e-36	144.00
IUUC-Xma-133144	Xiphophorus maculatus	33.12	3.00e-32	131.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence