iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000056784.5	ENSDART00000133250.2	ENSDARP00000114968.1
ENSDARG00000056784.5	ENSDART00000147935.1	ENSDARP00000114318.1
ENSDARG00000056784.5	ENSDART00000079317.4	ENSDARP00000073773.4
ENSDARG00000056784.5	ENSDART00000169087.1	ENSDARP00000140314.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	9.10e-11	42.7	298	342

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
            C+vC++gge    l++C+ C ++fH  Cl ++  ++ p+ + w C+ C+s
   Q: 298  ECAVCKDGGE----LICCDGCPRAFHLSCLVPP-LTSIPRGT-WRCQLCQS 342
           6*********....*******************.*******6.******86 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSKVESFEES DLRSQLRACR TEIAMAIHDP FPLLYGLADH NVISEQILRE TLERKKKDGI 60
HKAIYSLLTL LLDQDTTVLK AFWKNLCKEY NKECYPKLET VFMNLPKGLK QEVRQNGNPK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTAAGG TGGAGAGTTT TGAAGAGTCT GACCTGCGCT CACAGCTTCG AGCTTGTCGC 60
ACTGAGATCG CGATGGCAAT TCATGACCCT TTCCCACTGC TGTATGGACT GGCAGATCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR008087--AIRE
IPR004865--HSR_dom
IPR000770--SAND_dom
IPR010919--SAND_dom-like
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51414--HSR
PS50864--SAND
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF03172--HSR
PF00628--PHD

PRINTS

PR01711--AIREGULATOR

SMART

SM00249--PHD

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0003682--F:chromatin binding
GO:0042393--F:histone binding
GO:0000977--F:RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003712--F:transcription cofactor activity
GO:0045182--F:translation regulator activity
GO:0008270--F:zinc ion binding
GO:0006959--P:humoral immune response
GO:0006955--P:immune response
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001612	Ailuropoda melanoleuca	41.30	2.00e-60	226.00
IUUC-Bgr-012025	Blumeria graminis	45.00	6.00e-10	60.50
IUUC-Bta-012988	Bos taurus	39.77	1.00e-60	227.00
IUUC-Bra-017395	Brassica rapa	48.33	3.00e-14	74.70
IUUC-Cja-019486	Callithrix jacchus	46.88	6.00e-25	108.00
IUUC-Cfa-021069	Canis familiaris	42.64	3.00e-61	229.00
IUUC-Cpo-021649	Cavia porcellus	41.50	3.00e-47	183.00
IUUC-Csa-023960	Chlorocebus sabaeus	40.64	5.00e-54	205.00
IUUC-Dno-029869	Dasypus novemcinctus	33.82	2.00e-37	150.00
IUUC-Dor-030263	Dipodomys ordii	60.34	5.00e-15	75.10
IUUC-Eca-034328	Equus caballus	42.27	3.00e-64	239.00
IUUC-Fca-035400	Felis catus	42.43	1.00e-59	224.00
IUUC-Fal-036644	Ficedula albicollis	39.07	3.00e-49	189.00
IUUC-Fox-038014	Fusarium oxysporum	36.84	1.00e-07	53.10
IUUC-Fso-038262	Fusarium solani	37.10	3.00e-09	58.20
IUUC-Gma-043681	Glycine max	33.81	3.00e-14	73.90
IUUC-Ggo-045250	Gorilla gorilla	40.06	1.00e-48	187.00
IUUC-Hsa-046603	Homo sapiens	38.86	3.00e-53	202.00
IUUC-Itr-048977	Ictidomys tridecemlineatus	34.57	2.00e-64	240.00
IUUC-Lch-050310	Latimeria chalumnae	41.73	7.00e-95	341.00
IUUC-Loc-052508	Lepisosteus oculatus	49.05	3.00e-125	442.00
IUUC-Laf-054028	Loxodonta africana	40.18	8.00e-57	214.00
IUUC-Mcc-054935	Macaca mulatta	40.58	5.00e-54	205.00
IUUC-Mga-059318	Meleagris gallopavo	47.13	5.00e-17	81.60
IUUC-Mmr-061557	Microcebus murinus	40.71	2.00e-48	187.00
IUUC-Mdo-062475	Monodelphis domestica	34.83	4.00e-74	272.00
IUUC-Mmu-063994	Mus musculus	35.41	2.00e-70	260.00
IUUC-Mpu-066347	Mustela putorius furo	41.43	4.00e-62	232.00
IUUC-Mlu-068239	Myotis lucifugus	36.54	4.00e-41	162.00
IUUC-Nle-069544	Nomascus leucogenys	69.09	4.00e-20	91.70
IUUC-Opr-071199	Ochotona princeps	39.06	6.00e-24	105.00
IUUC-Ont-072571	Oreochromis niloticus	41.29	1.00e-91	330.00
IUUC-Oan-073739	Ornithorhynchus anatinus	44.57	6.00e-70	258.00
IUUC-Ogl-077865	Oryza glaberrima	58.70	1.00e-12	69.30
IUUC-Olo-080499	Oryza longistaminata	58.70	1.00e-12	69.70
IUUC-Opu-083209	Oryza punctata	58.70	1.00e-12	69.70
IUUC-Ola-086528	Oryzias latipes	37.06	2.00e-50	193.00
IUUC-Oga-088353	Otolemur garnettii	34.43	7.00e-59	221.00
IUUC-Oar-090065	Ovis aries	39.19	5.00e-59	221.00
IUUC-Ptr-091347	Pan troglodytes	38.05	3.00e-48	186.00
IUUC-Pan-092423	Papio anubis	40.57	6.00e-49	188.00
IUUC-Psi-093798	Pelodiscus sinensis	38.01	2.00e-81	296.00
IUUC-Pfo-096145	Poecilia formosa	42.68	5.00e-51	195.00
IUUC-Pab-098369	Pongo abelii	40.37	1.00e-43	170.00
IUUC-Pop-099262	Populus trichocarpa	42.86	6.00e-14	73.60
IUUC-Pca-100537	Procavia capensis	32.84	2.00e-59	223.00
IUUC-Ppe-101215	Prunus persica	50.00	8.00e-15	76.30
IUUC-Pva-102639	Pteropus vampyrus	41.57	2.00e-47	183.00
IUUC-Rno-105285	Rattus norvegicus	35.30	3.00e-70	259.00
IUUC-Sha-107159	Sarcophilus harrisii	36.01	5.00e-74	272.00
IUUC-Stu-112427	Solanum tuberosum	53.45	3.00e-15	77.80
IUUC-Sbi-113930	Sorghum bicolor	50.00	5.00e-12	67.80
IUUC-Ssc-115773	Sus scrofa	41.67	8.00e-60	224.00
IUUC-Tgu-116922	Taeniopygia guttata	36.36	2.00e-43	169.00
IUUC-Tru-118263	Takifugu rubripes	37.94	4.00e-81	295.00
IUUC-Tsy-119270	Tarsius syrichta	31.90	1.00e-18	88.20
IUUC-Tni-120138	Tetraodon nigroviridis	36.16	8.00e-73	268.00
IUUC-Tca-121314	Theobroma cacao	52.54	6.00e-15	76.60
IUUC-Tbe-128077	Tupaia belangeri	42.17	1.00e-38	154.00
IUUC-Ttr-128781	Tursiops truncatus	45.65	5.00e-35	142.00
IUUC-Vvi-131561	Vitis vinifera	46.03	7.00e-14	72.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence