iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003799

Ensembl Protein ID

ENSAPLP00000003545.1

UniProt Accession

U3I8H4; U3I8H4_ANAPL

Genbank Protein ID

ENSAPLP00000003545

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01128884

Gene Name

RAB40C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000004049.1	ENSAPLT00000004146.1	ENSAPLP00000003545.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	1.00e-16	60.2	144	191

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 1    lsklwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++k+w ++++++SLq+LC++aI++c++ + +   dkLPLP  +k++L+++++
   Q: 144  MEKIW-RPNRVFSLQDLCCRAIVSCTPVHLI---DKLPLPVTIKSHLKSFSM 191
           67899.**********************888...***************986 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

GTAASPELFL LGIDYKTTTI LLDGRRVKLE LWDTSGQGRF CTIFRSYSRG AQGILLVYDI 60
TNRWSFDGID RWIKEIDEHA PGVPRILVGN RLHLAFKRQV PTEQARAYAE KNCMTFFEVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGACAGCCG CTTCCCCAGA GCACNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 60
NNNNNNNNGG GAGCAGCAGC TCAGCTTGGT TCAGAGGTGC TGCTTGCAAG CCGAGCTGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0005525--F:GTP binding
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001616	Ailuropoda melanoleuca	88.09	2.00e-116	411.00
IUUC-Ame-011203	Astyanax mexicanus	90.50	8.00e-130	455.00
IUUC-Bta-013490	Bos taurus	88.98	2.00e-123	434.00
IUUC-Cja-019990	Callithrix jacchus	88.62	6.00e-122	429.00
IUUC-Cpo-022437	Cavia porcellus	88.14	2.00e-115	407.00
IUUC-Csa-024147	Chlorocebus sabaeus	88.98	2.00e-123	434.00
IUUC-Dre-027427	Danio rerio	90.12	1.00e-129	455.00
IUUC-Dno-029998	Dasypus novemcinctus	88.51	1.00e-115	410.00
IUUC-Dor-030584	Dipodomys ordii	81.55	7.00e-107	379.00
IUUC-Ete-033080	Echinops telfairi	87.35	8.00e-115	405.00
IUUC-Eca-033423	Equus caballus	91.45	2.00e-124	437.00
IUUC-Eeu-034590	Erinaceus europaeus	85.34	3.00e-111	393.00
IUUC-Fca-035697	Felis catus	88.93	6.00e-121	426.00
IUUC-Fal-037070	Ficedula albicollis	88.57	2.00e-123	434.00
IUUC-Gmo-039605	Gadus morhua	87.65	5.00e-127	446.00
IUUC-Gga-040343	Gallus gallus	88.57	2.00e-123	434.00
IUUC-Gac-041833	Gasterosteus aculeatus	82.80	4.00e-121	426.00
IUUC-Hsa-046237	Homo sapiens	88.98	2.00e-123	434.00
IUUC-Itr-048902	Ictidomys tridecemlineatus	88.57	2.00e-123	434.00
IUUC-Lch-050193	Latimeria chalumnae	89.26	6.00e-128	449.00
IUUC-Loc-052243	Lepisosteus oculatus	90.12	1.00e-129	455.00
IUUC-Laf-054435	Loxodonta africana	87.35	2.00e-122	431.00
IUUC-Mcc-055337	Macaca mulatta	88.98	3.00e-123	434.00
IUUC-Meu-056731	Macropus eugenii	87.43	1.00e-78	285.00
IUUC-Mga-060027	Meleagris gallopavo	91.14	2.00e-122	431.00
IUUC-Mmr-061380	Microcebus murinus	88.57	2.00e-123	434.00
IUUC-Mdo-062438	Monodelphis domestica	87.76	1.00e-122	431.00
IUUC-Mmu-064046	Mus musculus	88.98	2.00e-123	434.00
IUUC-Mpu-066029	Mustela putorius furo	89.21	2.00e-123	434.00
IUUC-Mlu-067741	Myotis lucifugus	88.57	7.00e-123	432.00
IUUC-Nle-069240	Nomascus leucogenys	82.04	5.00e-110	390.00
IUUC-Ont-071248	Oreochromis niloticus	89.71	6.00e-129	452.00
IUUC-Oan-073432	Ornithorhynchus anatinus	90.99	4.00e-120	422.00
IUUC-Olo-080270	Oryza longistaminata	34.04	2.00e-12	66.60
IUUC-Ola-086486	Oryzias latipes	81.20	5.00e-116	410.00
IUUC-Oga-088293	Otolemur garnettii	88.57	2.00e-123	434.00
IUUC-Ptr-090720	Pan troglodytes	88.98	2.00e-123	434.00
IUUC-Pan-091732	Papio anubis	88.98	2.00e-123	434.00
IUUC-Psi-093627	Pelodiscus sinensis	87.35	1.00e-115	409.00
IUUC-Pfo-097105	Poecilia formosa	88.89	3.00e-128	450.00
IUUC-Pab-098054	Pongo abelii	88.98	2.00e-123	434.00
IUUC-Pca-100775	Procavia capensis	88.60	9.00e-88	315.00
IUUC-Pva-102658	Pteropus vampyrus	88.16	3.00e-122	430.00
IUUC-Rno-105303	Rattus norvegicus	88.98	2.00e-123	434.00
IUUC-Sha-106536	Sarcophilus harrisii	87.76	1.00e-122	431.00
IUUC-Tgu-116858	Taeniopygia guttata	94.90	5.00e-88	316.00
IUUC-Tru-118264	Takifugu rubripes	91.38	1.00e-125	442.00
IUUC-Tni-120350	Tetraodon nigroviridis	89.30	2.00e-128	451.00
IUUC-Ttr-129236	Tursiops truncatus	89.39	6.00e-125	439.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence