iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Osa-085571

UUCD1 version

UUC-OrS-00446

Ensembl Protein ID

OS08T0539300-01

UniProt Accession

Q69UA1; Q69UA1_ORYSJ

Genbank Protein ID

BAD33143.1; BAF24290.1; BAT06472.1; EEE69078.1

Protein Name

Os08g0539300 protein; Putative VIP2 protein

Genbank Nucleotide ID

AP004592; AP008214; AP014964; CM000145

Gene Name

P0666G10.111; Os08g0539300; OsJ_28112; OSNPB_080539300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OS08G0539300	OS08T0539300-01	OS08T0539300-01

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	24482434

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	2.90e-07	31.8	25	69

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++     + +  l+CgH fh+dC+    g+  +++++ +CP Cr
   Q: 25   CSICLDPVvagGRSVARLQCGHEFHLDCI----GSAFNAKGAMQCPNCR 69
           ********7775557889**********8....55679**********8 PP

Organism

Oryza sativa

Protein Sequence
(Fasta)

MDLERSPPPP PPEGGGGGGG GGASCSICLD PVVAGGRSVA RLQCGHEFHL DCIGSAFNAK 60
GAMQCPNCRK IEKGRWLYAS GHHPSPDIDI GGWVTGETYD ITSDIPFGFQ WCPFSGFTQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCTTCCTTC CTTCCTTTGG ACACACCTCC CCATTTCCCT CCCTCTCTCC TCTTCCACGA 60
GCTCACCTCT CCTCTCCTCT CCTCTCCTCT CCCGCGAGCG AGCGAGAGAG AGGCAGGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

osa:4346180

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001080	Aegilops tauschii	79.70	7.00e-168	582.00
IUUC-Aml-001735	Ailuropoda melanoleuca	27.27	9.00e-06	44.30
IUUC-Atr-002748	Amborella trichopoda	40.20	2.00e-64	238.00
IUUC-Apl-003314	Anas platyrhynchos	26.17	7.00e-05	41.20
IUUC-Aca-004841	Anolis carolinensis	45.28	4.00e-05	42.00
IUUC-Ame-011941	Astyanax mexicanus	27.27	1.00e-05	44.30
IUUC-Bta-012612	Bos taurus	27.27	1.00e-05	44.30
IUUC-Bdi-014446	Brachypodium distachyon	48.98	5.00e-45	174.00
IUUC-Cja-019328	Callithrix jacchus	27.27	3.00e-05	42.70
IUUC-Csa-023525	Chlorocebus sabaeus	27.27	2.00e-05	43.10
IUUC-Dre-028695	Danio rerio	28.18	6.00e-06	45.10
IUUC-Fca-036290	Felis catus	27.27	2.00e-05	43.50
IUUC-Gmo-039590	Gadus morhua	32.81	7.00e-06	44.70
IUUC-Gga-040162	Gallus gallus	26.36	2.00e-05	43.10
IUUC-Gac-041759	Gasterosteus aculeatus	27.27	5.00e-06	45.10
IUUC-Ggo-044598	Gorilla gorilla	27.27	4.00e-05	42.40
IUUC-Hsa-046570	Homo sapiens	27.27	2.00e-05	43.10
IUUC-Hvu-047110	Hordeum vulgare	76.27	7.00e-66	241.00
IUUC-Itr-049005	Ictidomys tridecemlineatus	27.27	5.00e-06	45.10
IUUC-Lpe-051502	Leersia perrieri	80.61	4.00e-167	579.00
IUUC-Laf-054360	Loxodonta africana	27.27	1.00e-05	44.30
IUUC-Meu-056430	Macropus eugenii	26.13	1.00e-05	43.90
IUUC-Mmr-061378	Microcebus murinus	27.27	4.00e-06	45.40
IUUC-Mdo-061828	Monodelphis domestica	26.79	4.00e-06	45.40
IUUC-Mmu-064234	Mus musculus	27.27	8.00e-06	44.70
IUUC-Mac-064552	Musa acuminata	46.91	5.00e-98	350.00
IUUC-Mpu-066343	Mustela putorius furo	27.27	6.00e-06	43.90
IUUC-Mlu-067905	Myotis lucifugus	27.27	1.00e-05	44.30
IUUC-Nle-069498	Nomascus leucogenys	27.27	2.00e-05	43.10
IUUC-Opr-070885	Ochotona princeps	27.27	9.00e-06	44.30
IUUC-Ont-071306	Oreochromis niloticus	28.18	1.00e-05	43.90
IUUC-Oan-073617	Ornithorhynchus anatinus	27.27	1.00e-05	43.50
IUUC-Oba-075224	Oryza barthii	99.30	0.00e+00	776.00
IUUC-Obr-076395	Oryza brachyantha	50.13	2.00e-81	295.00
IUUC-Ogl-077568	Oryza glaberrima	99.06	0.00e+00	774.00
IUUC-Ogu-077958	Oryza glumaepatula	98.59	0.00e+00	775.00
IUUC-Oin-079699	Oryza indica	99.30	0.00e+00	777.00
IUUC-Olo-080379	Oryza longistaminata	100.00	0.00e+00	693.00
IUUC-Ome-081380	Oryza meridionalis	90.33	0.00e+00	675.00
IUUC-Oni-082776	Oryza nivara	99.76	0.00e+00	778.00
IUUC-Opu-083671	Oryza punctata	95.29	0.00e+00	756.00
IUUC-Oru-085146	Oryza rufipogon	100.00	0.00e+00	783.00
IUUC-Ola-086359	Oryzias latipes	29.09	6.00e-07	48.10
IUUC-Oga-088768	Otolemur garnettii	27.27	9.00e-06	44.30
IUUC-Pan-092352	Papio anubis	27.27	2.00e-05	43.10
IUUC-Psi-093534	Pelodiscus sinensis	27.03	6.00e-06	43.50
IUUC-Pma-094460	Petromyzon marinus	30.59	1.00e-04	39.70
IUUC-Pfo-097019	Poecilia formosa	26.36	3.00e-06	45.10
IUUC-Pab-098315	Pongo abelii	27.27	2.00e-05	43.10
IUUC-Rno-105607	Rattus norvegicus	27.27	9.00e-06	44.30
IUUC-Sha-107129	Sarcophilus harrisii	26.36	1.00e-05	44.30
IUUC-Sit-110693	Setaria italica	79.10	2.00e-163	567.00
IUUC-Sbi-114879	Sorghum bicolor	80.54	1.00e-173	601.00
IUUC-Ssc-116198	Sus scrofa	27.27	7.00e-06	44.70
IUUC-Tru-118590	Takifugu rubripes	27.27	6.00e-06	45.10
IUUC-Tni-120695	Tetraodon nigroviridis	27.27	6.00e-06	45.10
IUUC-Tae-125355	Triticum aestivum	79.03	0.00e+00	636.00
IUUC-Tur-126263	Triticum urartu	79.34	2.00e-166	577.00
IUUC-Ttr-128583	Tursiops truncatus	27.27	8.00e-06	44.70
IUUC-Xma-133994	Xiphophorus maculatus	26.36	3.00e-06	44.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence