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Tag Content
UUCD2 ID IUUC-Pop-099149
UUCD1 version UUC-PoT-01205
Ensembl Protein ID POPTR_0008s00290.1
UniProt Accession B9HK05; B9HK05_POPTR
Genbank Protein ID EEE89252.1
Protein Name Katanin p80 WD40 repeat-containing subunit B1 homolog
Genbank Nucleotide ID CM000344
Gene Name POPTRDRAFT_803047; POPTR_0008s00290g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0008s00290 POPTR_0008s00290.1 POPTR_0008s00290.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.60e-38 129.0 141 179
UBD/Beta-Prp 2.30e-59 202.1 14 256
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt +v++++f +d + +vsG+ D+t+k+WDl+ g+ll+
   Q: 141  GHTRGVSAIRFtPDgRWVVSGGEDNTVKLWDLTAGKLLH 179
           8***********99999******************9986 PP
   

   UBD/Beta-Prp
   S: 8    hhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsv 97
           +h+s ++c+k+  +++++l+tg++d+++ +w + +++++ slsgh++++ +v+f++++ + + g+  +tik+wdl+  k+v+tl+gh ++ 
   Q: 14   AHSSSVNCLKIgRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNC 104
           7999999****99*********************************************999999999************************ PP
   S: 98   lslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsf 188
            s++f+p g++++sGs d  +++wd++++ c++ t +gh++ v+ +++ pdg+ +vsG+ D+tv+lWdl  gkll++++  h++++++++f
   Q: 105  ISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIH-TYKGHTRGVSAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKY-HEGQIQCIDF 193
           *********************************.********************************************97.********** PP
   S: 189  dsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlr 252
           ++  + l++gs d+tvk+wdl+t e + +    t+ v+++ f p++  l++g  ++s++++  +
   Q: 194  HPHEFLLATGSADRTVKFWDLETFELIGSAGTETTGVRCLTFNPDGRTLLCGL-HESLKVFSWE 256
           *******************************************9999999995.7777775444 PP
   
Organism Populus trichocarpa
Functional Description
(View)

Functional Description


     May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
 May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
Protein Sequence
(Fasta)
MTTKRAYKLQ EFVAHSSSVN CLKIGRKSSR VLVTGGEDHK VNLWAIGKPN AILSLSGHTS 60
GIDSVSFDSS EVLVAAGAAS GTIKLWDLEE AKIVRTLTGH RSNCISVDFH PFGEFFASGS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Pop-099149|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GAGAGAGAGA GAGAGAGCGA GAGAGAGAGA GAGGAGAGGT ATACATCTCT CTTGTGAAAG 60
CGCCCCTTCT CCTTTCCCCC TTCCTTGCCC CTGGTTGTTA CTCTAGGCTT AGGCATCCTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pop-099149|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF13925--Katanin_con80
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0051013--P:microtubule severing
KEGG pop:POPTR_0008s00290g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000954 Aegilops tauschii 58.63 7.00e-164 571.00
IUUC-Aml-002187 Ailuropoda melanoleuca 51.83 4.00e-101 362.00
IUUC-Atr-002899 Amborella trichopoda 65.12 0.00e+00 1011.00
IUUC-Apl-003305 Anas platyrhynchos 53.22 1.00e-103 370.00
IUUC-Aca-004635 Anolis carolinensis 52.20 4.00e-93 335.00
IUUC-Aly-006226 Arabidopsis lyrata 61.18 0.00e+00 957.00
IUUC-Ath-007323 Arabidopsis thaliana 61.28 0.00e+00 979.00
IUUC-Acl-008307 Aspergillus clavatus 31.66 1.00e-28 120.00
IUUC-Bta-012527 Bos taurus 52.49 6.00e-104 370.00
IUUC-Bdi-014652 Brachypodium distachyon 71.98 0.00e+00 679.00
IUUC-Bol-016374 Brassica oleracea 61.93 0.00e+00 954.00
IUUC-Bra-017390 Brassica rapa 60.07 0.00e+00 951.00
IUUC-Cja-019706 Callithrix jacchus 52.49 2.00e-103 369.00
IUUC-Cpo-021710 Cavia porcellus 52.82 7.00e-105 374.00
IUUC-Cre-022746 Chlamydomonas reinhardtii 43.27 6.00e-82 298.00
IUUC-Csa-023546 Chlorocebus sabaeus 52.92 2.00e-100 359.00
IUUC-Dre-028215 Danio rerio 52.82 6.00e-103 367.00
IUUC-Dno-029314 Dasypus novemcinctus 52.82 9.00e-104 370.00
IUUC-Dor-030482 Dipodomys ordii 52.49 2.00e-104 372.00
IUUC-Dme-032188 Drosophila melanogaster 37.76 5.00e-58 218.00
IUUC-Eca-034143 Equus caballus 52.16 4.00e-101 361.00
IUUC-Fca-035924 Felis catus 52.82 4.00e-104 371.00
IUUC-Fal-037387 Ficedula albicollis 54.15 7.00e-107 380.00
IUUC-Gmo-038692 Gadus morhua 52.00 1.00e-103 370.00
IUUC-Gga-040597 Gallus gallus 52.82 5.00e-105 374.00
IUUC-Gac-042004 Gasterosteus aculeatus 52.82 4.00e-100 358.00
IUUC-Gma-044134 Glycine max 69.90 0.00e+00 1064.00
IUUC-Ggo-044761 Gorilla gorilla 52.49 1.00e-103 370.00
IUUC-Hsa-045698 Homo sapiens 52.49 6.00e-104 370.00
IUUC-Hvu-047649 Hordeum vulgare 64.43 0.00e+00 664.00
IUUC-Itr-048697 Ictidomys tridecemlineatus 52.49 4.00e-104 371.00
IUUC-Lch-049674 Latimeria chalumnae 53.33 2.00e-107 382.00
IUUC-Lpe-051554 Leersia perrieri 71.61 0.00e+00 681.00
IUUC-Loc-052623 Lepisosteus oculatus 53.16 2.00e-101 362.00
IUUC-Laf-054587 Loxodonta africana 52.16 2.00e-103 369.00
IUUC-Mcc-055851 Macaca mulatta 52.49 1.00e-103 370.00
IUUC-Meu-056704 Macropus eugenii 53.16 8.00e-105 374.00
IUUC-Mtr-058053 Medicago truncatula 69.28 0.00e+00 1045.00
IUUC-Mga-059608 Meleagris gallopavo 52.36 1.00e-102 367.00
IUUC-Mmr-061154 Microcebus murinus 52.49 7.00e-104 370.00
IUUC-Mdo-062365 Monodelphis domestica 52.82 1.00e-103 370.00
IUUC-Mmu-063754 Mus musculus 52.49 2.00e-104 372.00
IUUC-Mac-065100 Musa acuminata 62.94 0.00e+00 952.00
IUUC-Mpu-066245 Mustela putorius furo 53.16 2.00e-104 372.00
IUUC-Mlu-067692 Myotis lucifugus 52.68 7.00e-103 367.00
IUUC-Nle-070051 Nomascus leucogenys 52.16 1.00e-102 367.00
IUUC-Opr-070855 Ochotona princeps 52.16 4.00e-103 368.00
IUUC-Ont-071883 Oreochromis niloticus 52.82 4.00e-102 365.00
IUUC-Oan-073293 Ornithorhynchus anatinus 53.16 9.00e-101 360.00
IUUC-Ocu-074644 Oryctolagus cuniculus 52.49 3.00e-104 372.00
IUUC-Oba-075448 Oryza barthii 64.02 7.00e-180 623.00
IUUC-Obr-076385 Oryza brachyantha 73.12 0.00e+00 684.00
IUUC-Ogl-077427 Oryza glaberrima 72.69 0.00e+00 681.00
IUUC-Ogu-078428 Oryza glumaepatula 57.36 1.00e-122 433.00
IUUC-Oin-079811 Oryza indica 70.65 0.00e+00 670.00
IUUC-Olo-080245 Oryza longistaminata 70.86 0.00e+00 674.00
IUUC-Ome-081239 Oryza meridionalis 69.68 0.00e+00 634.00
IUUC-Oni-082640 Oryza nivara 64.02 7.00e-180 623.00
IUUC-Opu-083748 Oryza punctata 66.95 0.00e+00 640.00
IUUC-Oru-084609 Oryza rufipogon 64.02 7.00e-180 623.00
IUUC-Osa-085988 Oryza sativa 63.44 4.00e-160 558.00
IUUC-Ola-087483 Oryzias latipes 47.27 1.00e-93 336.00
IUUC-Oga-087964 Otolemur garnettii 52.49 5.00e-104 371.00
IUUC-Oar-089483 Ovis aries 52.16 4.00e-102 365.00
IUUC-Ptr-091387 Pan troglodytes 52.49 6.00e-104 371.00
IUUC-Pan-092623 Papio anubis 52.49 1.00e-103 370.00
IUUC-Psi-093830 Pelodiscus sinensis 53.16 2.00e-100 358.00
IUUC-Ppa-095379 Physcomitrella patens 82.72 9.00e-157 546.00
IUUC-Pfo-096755 Poecilia formosa 52.16 4.00e-101 362.00
IUUC-Pab-097564 Pongo abelii 52.49 2.00e-103 369.00
IUUC-Pca-100357 Procavia capensis 56.80 2.00e-76 279.00
IUUC-Ppe-101237 Prunus persica 77.61 0.00e+00 1208.00
IUUC-Pva-102397 Pteropus vampyrus 48.17 2.00e-91 329.00
IUUC-Rno-105349 Rattus norvegicus 52.49 2.00e-104 372.00
IUUC-Smo-109409 Selaginella moellendorffii 67.79 2.00e-162 565.00
IUUC-Sit-110360 Setaria italica 67.11 0.00e+00 694.00
IUUC-Sly-111307 Solanum lycopersicum 67.21 0.00e+00 1030.00
IUUC-Stu-112053 Solanum tuberosum 63.22 0.00e+00 986.00
IUUC-Sar-112953 Sorex araneus 45.61 4.00e-58 218.00
IUUC-Ssc-115949 Sus scrofa 46.91 7.00e-49 187.00
IUUC-Tgu-117461 Taeniopygia guttata 54.15 2.00e-107 382.00
IUUC-Tru-117865 Takifugu rubripes 50.17 6.00e-95 341.00
IUUC-Tsy-119036 Tarsius syrichta 58.54 2.00e-40 159.00
IUUC-Tni-120903 Tetraodon nigroviridis 50.00 1.00e-93 336.00
IUUC-Tca-121185 Theobroma cacao 74.00 0.00e+00 1236.00
IUUC-Tae-125263 Triticum aestivum 65.29 0.00e+00 667.00
IUUC-Tur-126411 Triticum urartu 56.39 3.00e-160 558.00
IUUC-Ttr-128172 Tursiops truncatus 52.49 3.00e-104 372.00
IUUC-Vvi-131489 Vitis vinifera 75.99 0.00e+00 1206.00
IUUC-Xtr-132915 Xenopus tropicalis 51.99 2.00e-99 356.00
IUUC-Xma-134133 Xiphophorus maculatus 51.50 1.00e-98 353.00
Created Date 25-Jun-2017

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