iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           CaiCle+f   ++ ++v +C H fh++C+  w        ++ +CPlC
   Q: 272  CAICLEEFtegQE-LRVISCLHEFHRTCVDPW------LHQHRTCPLC 312
           ********66333.******************......********** PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSGGHQLQLA VLWPWLLMAT LHAGFGHTGL VLAAAVESER SAEQKAIIRV IPLKMDPTGK 60
LNLTLEGVFA GVAEVSPAEG KLMQSHPLYL CNASDDDNLE PGFISIVKLE SPRRAPRPCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTGGTG GCCACCAGCT GCAGCTGGCT GTCCTCTGGC CCTGGCTGCT GATGGCGACG 60
CTGCATGCAG GCTTTGGACA CACAGGACTG GTGCTGGCAG CAGCGGTGGA GTCGGAAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005887--C:integral component of plasma membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0072089--P:stem cell proliferation
GO:0038018--P:Wnt receptor catabolic process

KEGG

rno:303412

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001826	Ailuropoda melanoleuca	79.62	0.00e+00	981.00
IUUC-Apl-003222	Anas platyrhynchos	61.80	7.00e-133	468.00
IUUC-Aca-004606	Anolis carolinensis	62.77	3.00e-25	109.00
IUUC-Aly-006309	Arabidopsis lyrata	51.02	7.00e-12	64.70
IUUC-Ame-011450	Astyanax mexicanus	47.95	2.00e-52	200.00
IUUC-Bta-012714	Bos taurus	78.98	0.00e+00	983.00
IUUC-Cel-018318	Caenorhabditis elegans	65.22	6.00e-15	75.50
IUUC-Cja-018949	Callithrix jacchus	85.98	1.00e-97	348.00
IUUC-Cfa-021169	Canis familiaris	76.42	0.00e+00	961.00
IUUC-Cpo-022010	Cavia porcellus	93.06	8.00e-162	563.00
IUUC-Csa-023712	Chlorocebus sabaeus	77.66	0.00e+00	771.00
IUUC-Cho-024867	Choloepus hoffmanni	31.48	2.00e-28	120.00
IUUC-Cin-025569	Ciona intestinalis	35.74	6.00e-34	139.00
IUUC-Csv-025869	Ciona savignyi	32.43	2.00e-38	154.00
IUUC-Dre-027851	Danio rerio	44.24	7.00e-58	218.00
IUUC-Dno-029646	Dasypus novemcinctus	74.12	0.00e+00	868.00
IUUC-Dor-030965	Dipodomys ordii	72.83	0.00e+00	926.00
IUUC-Ete-033153	Echinops telfairi	75.45	0.00e+00	885.00
IUUC-Eca-034222	Equus caballus	83.69	0.00e+00	1016.00
IUUC-Eeu-035320	Erinaceus europaeus	74.78	1.00e-81	297.00
IUUC-Fca-036163	Felis catus	81.11	0.00e+00	1040.00
IUUC-Fal-037463	Ficedula albicollis	60.62	1.00e-110	394.00
IUUC-Gmo-039022	Gadus morhua	50.50	1.00e-39	156.00
IUUC-Gga-040209	Gallus gallus	59.86	9.00e-121	427.00
IUUC-Ggo-045644	Gorilla gorilla	82.17	0.00e+00	1006.00
IUUC-Hsa-045983	Homo sapiens	81.91	0.00e+00	1026.00
IUUC-Itr-049074	Ictidomys tridecemlineatus	83.60	0.00e+00	1060.00
IUUC-Lch-050004	Latimeria chalumnae	32.68	1.00e-19	91.70
IUUC-Loc-052503	Lepisosteus oculatus	51.87	2.00e-48	186.00
IUUC-Laf-054039	Loxodonta africana	80.49	0.00e+00	1010.00
IUUC-Mcc-054760	Macaca mulatta	81.02	0.00e+00	992.00
IUUC-Meu-055948	Macropus eugenii	62.15	0.00e+00	626.00
IUUC-Mtr-058712	Medicago truncatula	31.54	4.00e-13	67.40
IUUC-Mga-060022	Meleagris gallopavo	65.96	8.00e-80	291.00
IUUC-Mmr-061100	Microcebus murinus	82.42	0.00e+00	1059.00
IUUC-Mdo-062909	Monodelphis domestica	69.44	0.00e+00	838.00
IUUC-Mmu-063835	Mus musculus	90.70	0.00e+00	1294.00
IUUC-Mpu-066916	Mustela putorius furo	79.59	0.00e+00	997.00
IUUC-Mlu-067234	Myotis lucifugus	79.29	0.00e+00	989.00
IUUC-Nle-069493	Nomascus leucogenys	81.78	0.00e+00	1008.00
IUUC-Opr-070218	Ochotona princeps	38.36	5.00e-31	129.00
IUUC-Ont-072483	Oreochromis niloticus	35.60	7.00e-46	179.00
IUUC-Oan-073037	Ornithorhynchus anatinus	81.86	1.00e-98	354.00
IUUC-Ocu-074655	Oryctolagus cuniculus	80.89	0.00e+00	1041.00
IUUC-Ola-087097	Oryzias latipes	45.35	2.00e-59	223.00
IUUC-Oga-088134	Otolemur garnettii	79.87	0.00e+00	1055.00
IUUC-Oar-089606	Ovis aries	72.23	0.00e+00	925.00
IUUC-Ptr-090726	Pan troglodytes	81.91	0.00e+00	1009.00
IUUC-Pan-091958	Papio anubis	80.89	0.00e+00	993.00
IUUC-Psi-093208	Pelodiscus sinensis	48.86	7.00e-138	484.00
IUUC-Pfo-096209	Poecilia formosa	54.08	4.00e-44	172.00
IUUC-Pab-097950	Pongo abelii	87.86	0.00e+00	739.00
IUUC-Pop-100061	Populus trichocarpa	57.69	2.00e-13	70.90
IUUC-Pca-100229	Procavia capensis	73.50	0.00e+00	936.00
IUUC-Pva-102480	Pteropus vampyrus	77.71	0.00e+00	985.00
IUUC-Sha-107577	Sarcophilus harrisii	70.32	0.00e+00	870.00
IUUC-Sar-113693	Sorex araneus	70.74	0.00e+00	826.00
IUUC-Ssc-115966	Sus scrofa	37.34	8.00e-31	129.00
IUUC-Tgu-116568	Taeniopygia guttata	63.50	1.00e-109	390.00
IUUC-Tru-118126	Takifugu rubripes	46.80	1.00e-54	207.00
IUUC-Tsy-119210	Tarsius syrichta	39.19	3.00e-42	166.00
IUUC-Tni-120241	Tetraodon nigroviridis	45.36	1.00e-43	170.00
IUUC-Tbe-128106	Tupaia belangeri	92.89	1.00e-131	464.00
IUUC-Ttr-128832	Tursiops truncatus	82.50	0.00e+00	780.00
IUUC-Xtr-132280	Xenopus tropicalis	38.06	2.00e-46	181.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence