iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pgr-103618

Ensembl Protein ID

EFP83317

UniProt Accession

E3KG58; E3KG58_PUCGT

Genbank Protein ID

EFP83317.1

Protein Name

UV excision repair protein Rad23

Genbank Nucleotide ID

DS178285

Gene Name

PGTG_09270

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGTG_09270	EFP83317	EFP83317

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.60e-23	81.1	147	186
ULD/UDP/UBQ/UBQ_PIM	4.70e-24	83.8	1	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlve.MGFdreealqaLraannnleaAveyLldg 41
           ++  ++++v+ MGF+re++ +a+raa+nn+++AveyL++g
   Q: 147  LQKTIDEIVNgMGFPREQVTKAMRAAFNNPDRAVEYLMTG 186
           57889********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkks 74
           mklt+ktl++++f l+v++++tve+lK +i++++g++peqqkLI++Gk+L Dd+t++++g+k++++ ++++ k+
   Q: 1    MKLTFKTLQKQQFVLDVEPSTTVEKLKSLIKESQGFEPEQQKLIFSGKVLADDKTIEQIGVKEKDFFVVMLIKP 74
           99***************************************************************988887665 PP

Organism

Puccinia graminis

Protein Sequence
(Fasta)

MKLTFKTLQK QQFVLDVEPS TTVEKLKSLI KESQGFEPEQ QKLIFSGKVL ADDKTIEQIG 60
VKEKDFFVVM LIKPKTAPTV PAPASVPSGA GAAASTSATA PTPAAAQPAT ATPSSTTAPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTATCACCCA CCACCACCTT CCTCCAACAT TCAACATCCA TATCCTTTCG CCTCTGCTGT 60
GAACCCCAAC AACTAAAGGA ACTGATCACG AAAGAATAAC AAGAAGGAAT ACCAACCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pgr:PGTG_09270

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001515	Ailuropoda melanoleuca	37.69	2.00e-28	117.00
IUUC-Atr-003116	Amborella trichopoda	35.99	5.00e-29	120.00
IUUC-Apl-003371	Anas platyrhynchos	40.83	1.00e-18	85.50
IUUC-Aly-005498	Arabidopsis lyrata	40.23	1.00e-37	148.00
IUUC-Ath-006676	Arabidopsis thaliana	37.76	2.00e-38	151.00
IUUC-Ago-007830	Ashbya gossypii	35.08	5.00e-22	97.10
IUUC-Afl-008605	Aspergillus flavus	37.19	3.00e-41	160.00
IUUC-Ani-009460	Aspergillus nidulans	38.21	3.00e-43	167.00
IUUC-Aor-010032	Aspergillus oryzae	37.31	4.00e-43	167.00
IUUC-Ate-010458	Aspergillus terreus	41.20	4.00e-32	130.00
IUUC-Ame-011342	Astyanax mexicanus	36.00	1.00e-23	102.00
IUUC-Bgr-012056	Blumeria graminis	36.48	2.00e-35	141.00
IUUC-Bta-012377	Bos taurus	45.52	3.00e-18	84.00
IUUC-Bci-013933	Botrytis cinerea	40.62	8.00e-24	102.00
IUUC-Bdi-014253	Brachypodium distachyon	34.31	2.00e-32	131.00
IUUC-Bol-015641	Brassica oleracea	32.74	5.00e-35	140.00
IUUC-Bra-017983	Brassica rapa	36.84	1.00e-33	135.00
IUUC-Cja-018946	Callithrix jacchus	37.69	2.00e-27	114.00
IUUC-Cfa-020577	Canis familiaris	36.92	6.00e-28	116.00
IUUC-Cpo-021850	Cavia porcellus	34.78	3.00e-38	150.00
IUUC-Cre-022810	Chlamydomonas reinhardtii	43.85	1.00e-18	85.50
IUUC-Csa-023183	Chlorocebus sabaeus	37.31	1.00e-27	115.00
IUUC-Cho-024814	Choloepus hoffmanni	39.82	6.00e-17	79.70
IUUC-Cne-027056	Cryptococcus neoformans	50.67	3.00e-17	80.90
IUUC-Dno-030017	Dasypus novemcinctus	45.52	4.00e-18	84.00
IUUC-Dor-030358	Dipodomys ordii	36.68	9.00e-29	119.00
IUUC-Dse-031336	Dothistroma septosporum	52.31	6.00e-22	96.70
IUUC-Dme-032027	Drosophila melanogaster	33.17	4.00e-24	103.00
IUUC-Ete-032583	Echinops telfairi	40.71	3.00e-16	77.80
IUUC-Eca-033599	Equus caballus	35.77	9.00e-25	105.00
IUUC-Eeu-034721	Erinaceus europaeus	49.09	3.00e-11	60.80
IUUC-Fca-036051	Felis catus	36.54	2.00e-27	114.00
IUUC-Fal-037148	Ficedula albicollis	40.00	1.00e-18	85.50
IUUC-Fox-037960	Fusarium oxysporum	42.33	4.00e-26	110.00
IUUC-Fso-038107	Fusarium solani	40.84	1.00e-26	112.00
IUUC-Gmo-039080	Gadus morhua	45.22	5.00e-19	86.30
IUUC-Ggr-040116	Gaeumannomyces graminis	50.75	9.00e-22	95.90
IUUC-Gga-040544	Gallus gallus	40.83	9.00e-19	86.30
IUUC-Gac-041621	Gasterosteus aculeatus	38.46	8.00e-32	129.00
IUUC-Ggo-045084	Gorilla gorilla	37.31	1.00e-27	115.00
IUUC-Hsa-046614	Homo sapiens	37.31	1.00e-27	115.00
IUUC-Itr-047875	Ictidomys tridecemlineatus	35.19	2.00e-39	154.00
IUUC-Kpa-049314	Komagataella pastoris	32.84	8.00e-41	159.00
IUUC-Lpe-051087	Leersia perrieri	36.84	3.00e-35	140.00
IUUC-Lma-053328	Leptosphaeria maculans	46.58	9.00e-14	65.90
IUUC-Laf-054589	Loxodonta africana	45.52	3.00e-18	84.30
IUUC-Mcc-055860	Macaca mulatta	37.31	1.00e-27	115.00
IUUC-Mpo-057609	Magnaporthe poae	50.77	8.00e-21	92.40
IUUC-Mtr-058148	Medicago truncatula	35.42	2.00e-34	138.00
IUUC-Mvi-060220	Microbotryum violaceum	50.00	5.00e-27	114.00
IUUC-Mmr-060819	Microcebus murinus	33.57	5.00e-39	153.00
IUUC-Mdo-062742	Monodelphis domestica	44.78	4.00e-27	113.00
IUUC-Mmu-063929	Mus musculus	33.65	7.00e-39	152.00
IUUC-Mpu-066684	Mustela putorius furo	37.69	9.00e-29	119.00
IUUC-Mlu-067787	Myotis lucifugus	45.52	2.00e-18	84.70
IUUC-Nfi-068390	Neosartorya fischeri	37.72	4.00e-38	150.00
IUUC-Ocu-073793	Oryctolagus cuniculus	38.24	1.00e-21	95.50
IUUC-Oba-075392	Oryza barthii	35.59	2.00e-35	141.00
IUUC-Obr-076660	Oryza brachyantha	32.13	1.00e-41	162.00
IUUC-Ogl-077021	Oryza glaberrima	39.39	4.00e-23	100.00
IUUC-Ogu-078883	Oryza glumaepatula	35.59	2.00e-35	141.00
IUUC-Oin-079817	Oryza indica	35.59	5.00e-35	140.00
IUUC-Olo-080929	Oryza longistaminata	34.38	3.00e-35	140.00
IUUC-Ome-081866	Oryza meridionalis	34.38	2.00e-35	141.00
IUUC-Oni-083092	Oryza nivara	35.59	5.00e-35	140.00
IUUC-Opu-083756	Oryza punctata	37.04	2.00e-36	144.00
IUUC-Oru-084816	Oryza rufipogon	35.59	5.00e-35	140.00
IUUC-Osa-086112	Oryza sativa	35.59	5.00e-35	140.00
IUUC-Ola-086540	Oryzias latipes	40.85	7.00e-16	76.60
IUUC-Oar-090387	Ovis aries	45.52	2.00e-18	84.70
IUUC-Ptr-090912	Pan troglodytes	37.31	1.00e-27	115.00
IUUC-Pan-092140	Papio anubis	37.31	1.00e-27	115.00
IUUC-Pno-095064	Phaeosphaeria nodorum	36.70	6.00e-18	83.20
IUUC-Pfo-096607	Poecilia formosa	32.76	7.00e-35	139.00
IUUC-Pab-097738	Pongo abelii	37.31	1.00e-27	115.00
IUUC-Pop-099726	Populus trichocarpa	33.83	2.00e-31	128.00
IUUC-Pva-102412	Pteropus vampyrus	37.31	8.00e-28	115.00
IUUC-Rno-105569	Rattus norvegicus	36.68	1.00e-27	115.00
IUUC-Sha-106918	Sarcophilus harrisii	45.52	8.00e-19	86.30
IUUC-Sja-107851	Schizosaccharomyces japonicus	45.36	5.00e-32	129.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	40.51	1.00e-23	102.00
IUUC-Smo-109518	Selaginella moellendorffii	36.39	7.00e-35	139.00
IUUC-Sit-110235	Setaria italica	37.69	3.00e-34	137.00
IUUC-Stu-112027	Solanum tuberosum	33.26	1.00e-43	168.00
IUUC-Sar-112925	Sorex araneus	39.82	1.00e-16	79.00
IUUC-Sbi-114835	Sorghum bicolor	42.34	1.00e-23	102.00
IUUC-Ssc-115460	Sus scrofa	36.29	8.00e-28	115.00
IUUC-Tgu-116918	Taeniopygia guttata	40.00	1.00e-18	85.50
IUUC-Tru-117920	Takifugu rubripes	37.31	8.00e-39	152.00
IUUC-Tsy-118836	Tarsius syrichta	39.82	3.00e-16	77.80
IUUC-Tca-121594	Theobroma cacao	34.64	3.00e-45	174.00
IUUC-Tvi-122617	Trichoderma virens	40.85	3.00e-49	186.00
IUUC-Tae-125620	Triticum aestivum	33.72	3.00e-34	137.00
IUUC-Tme-127092	Tuber melanosporum	39.35	3.00e-50	190.00
IUUC-Ttr-129232	Tursiops truncatus	37.45	5.00e-28	116.00
IUUC-Vpa-130357	Vicugna pacos	48.21	3.00e-11	60.80
IUUC-Vvi-131039	Vitis vinifera	34.53	7.00e-36	142.00
IUUC-Xma-133647	Xiphophorus maculatus	36.40	7.00e-28	116.00
IUUC-Zma-135678	Zea mays	35.27	5.00e-35	140.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence