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Tag Content
UUCD2 ID IUUC-Sbi-113834
UUCD1 version UUC-SoB-00388
Ensembl Protein ID Sb02g043730.1
UniProt Accession C5X6D4; C5X6D4_SORBI
Genbank Protein ID EER99954.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000761
Gene Name SORBI_002G426800
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb02g043730 Sb02g043730.1 Sb02g043730.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 41.05 3.00e-10 63.90 IUUC-Hsa-045828
E3 activity/RING/RING 41.56 3.00e-11 67.00 IUUC-Mmu-063891
E3 activity/RING/RING 32.88 8.00e-07 49.70 IUUC-Sce-106362
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Sorghum bicolor
Protein Sequence
(Fasta)
MASRDLRGSP RSAPRRHGAA APKDGSDLLS PRFRSAAELA GWDEESVLAA MVVEDTPVRE 60
SRRKRRASTS SAGGSAGSST RKRRPRRQFP AKIPPVVLAL DDEDDKTDTA EDGKSEVKAT 120
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Protein Fasta Sequence


>IUUC-Sbi-113834|E3,RING|Sorghum bicolor
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Nucleotide Sequence
(Fasta)
ATGGCGTCCA GAGACCTTCG CGGCAGCCCT AGATCCGCGC CGCGTCGCCA TGGGGCGGCG 60
GCGCCCAAGG ACGGCTCCGA CCTGCTCAGC CCGCGGTTCC GGTCGGCCGC CGAGCTGGCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sbi-113834|E3,RING|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2
Pfam

PF00097--zf-C3HC4
SMART

SM00184--RING
Gene Ontology

GO:0008270--F:zinc ion binding
KEGG sbi:SORBI_02g043730
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000755 Aegilops tauschii 59.22 1.00e-92 332.00
IUUC-Atr-002992 Amborella trichopoda 44.01 5.00e-54 203.00
IUUC-Apl-003963 Anas platyrhynchos 36.84 3.00e-10 59.30
IUUC-Aca-004420 Anolis carolinensis 35.71 2.00e-10 60.10
IUUC-Ath-007019 Arabidopsis thaliana 48.39 1.00e-45 177.00
IUUC-Ame-011521 Astyanax mexicanus 40.74 4.00e-12 65.10
IUUC-Bta-013002 Bos taurus 38.82 4.00e-12 65.50
IUUC-Bol-016180 Brassica oleracea 70.83 1.00e-40 159.00
IUUC-Bra-017905 Brassica rapa 66.04 2.00e-40 158.00
IUUC-Cpo-021643 Cavia porcellus 38.82 1.00e-12 67.40
IUUC-Csa-023638 Chlorocebus sabaeus 37.35 2.00e-12 66.60
IUUC-Cho-024319 Choloepus hoffmanni 36.47 1.00e-11 63.90
IUUC-Cin-025679 Ciona intestinalis 32.50 3.00e-09 54.70
IUUC-Csv-026052 Ciona savignyi 32.50 5.00e-09 53.90
IUUC-Dre-028519 Danio rerio 43.21 9.00e-13 67.40
IUUC-Dno-029294 Dasypus novemcinctus 36.47 1.00e-11 63.50
IUUC-Dme-031618 Drosophila melanogaster 46.67 3.00e-08 52.00
IUUC-Ete-032714 Echinops telfairi 36.71 7.00e-11 61.20
IUUC-Eca-033343 Equus caballus 37.65 9.00e-12 64.30
IUUC-Eeu-034656 Erinaceus europaeus 42.67 6.00e-10 58.50
IUUC-Fal-037048 Ficedula albicollis 38.16 5.00e-11 62.00
IUUC-Gmo-039179 Gadus morhua 35.45 1.00e-10 60.10
IUUC-Ggr-039833 Gaeumannomyces graminis 26.58 7.00e-08 51.20
IUUC-Gga-040444 Gallus gallus 36.84 2.00e-10 60.10
IUUC-Gac-042063 Gasterosteus aculeatus 32.71 3.00e-11 62.80
IUUC-Gma-044332 Glycine max 51.84 9.00e-62 229.00
IUUC-Ggo-045224 Gorilla gorilla 35.71 1.00e-12 67.00
IUUC-Hsa-045828 Homo sapiens 44.00 4.00e-11 62.40
IUUC-Itr-049000 Ictidomys tridecemlineatus 37.66 4.00e-12 65.10
IUUC-Lch-050649 Latimeria chalumnae 36.25 5.00e-10 58.50
IUUC-Loc-051847 Lepisosteus oculatus 35.92 3.00e-13 68.90
IUUC-Laf-054143 Loxodonta africana 38.96 6.00e-13 68.20
IUUC-Mcc-054920 Macaca mulatta 45.33 1.00e-11 64.30
IUUC-Meu-056684 Macropus eugenii 38.36 4.00e-09 55.50
IUUC-Mpo-057316 Magnaporthe poae 25.93 4.00e-07 48.50
IUUC-Mtr-058007 Medicago truncatula 41.78 3.00e-64 238.00
IUUC-Mla-059039 Melampsora laricipopulina 32.91 2.00e-08 53.10
IUUC-Mga-059699 Meleagris gallopavo 38.16 1.00e-10 60.80
IUUC-Mmr-061758 Microcebus murinus 34.88 1.00e-11 63.90
IUUC-Mmu-063891 Mus musculus 41.56 1.00e-12 67.40
IUUC-Opr-070905 Ochotona princeps 39.51 9.00e-13 67.80
IUUC-Ont-071477 Oreochromis niloticus 39.76 3.00e-12 65.50
IUUC-Ocu-073832 Oryctolagus cuniculus 33.00 1.00e-11 64.30
IUUC-Obr-076219 Oryza brachyantha 56.85 2.00e-75 275.00
IUUC-Ogl-077658 Oryza glaberrima 58.06 1.00e-85 309.00
IUUC-Ogu-078203 Oryza glumaepatula 58.98 1.00e-83 302.00
IUUC-Oin-079383 Oryza indica 58.45 5.00e-87 313.00
IUUC-Ome-081482 Oryza meridionalis 58.45 3.00e-88 317.00
IUUC-Oni-083025 Oryza nivara 58.71 2.00e-87 315.00
IUUC-Opu-083547 Oryza punctata 58.82 9.00e-82 296.00
IUUC-Oru-084946 Oryza rufipogon 56.07 3.00e-83 301.00
IUUC-Osa-085978 Oryza sativa 58.71 2.00e-87 315.00
IUUC-Ola-086478 Oryzias latipes 36.70 3.00e-12 63.20
IUUC-Oar-089647 Ovis aries 37.65 2.00e-12 66.20
IUUC-Psi-093604 Pelodiscus sinensis 40.79 2.00e-11 63.20
IUUC-Pma-094734 Petromyzon marinus 45.28 9.00e-09 54.30
IUUC-Ppa-095897 Physcomitrella patens 33.64 4.00e-19 87.80
IUUC-Pfo-096441 Poecilia formosa 40.00 2.00e-13 69.30
IUUC-Pop-099737 Populus trichocarpa 50.43 2.00e-59 223.00
IUUC-Pca-100552 Procavia capensis 38.16 6.00e-12 64.70
IUUC-Ppe-102024 Prunus persica 45.10 5.00e-65 242.00
IUUC-Sce-106362 Saccharomyces cerevisiae 32.88 8.00e-08 50.80
IUUC-Sha-106809 Sarcophilus harrisii 39.02 1.00e-11 63.50
IUUC-Sly-111317 Solanum lycopersicum 47.68 4.00e-53 201.00
IUUC-Stu-112783 Solanum tuberosum 40.19 1.00e-57 216.00
IUUC-Sar-113700 Sorex araneus 42.19 8.00e-11 60.80
IUUC-Tgu-117187 Taeniopygia guttata 39.47 3.00e-11 60.80
IUUC-Tru-118182 Takifugu rubripes 35.19 4.00e-12 65.10
IUUC-Tni-120205 Tetraodon nigroviridis 40.24 6.00e-11 60.80
IUUC-Tca-121416 Theobroma cacao 50.86 5.00e-56 210.00
IUUC-Tae-123092 Triticum aestivum 59.74 2.00e-93 335.00
IUUC-Tur-126688 Triticum urartu 58.11 9.00e-78 282.00
IUUC-Tbe-127865 Tupaia belangeri 41.18 9.00e-13 66.60
IUUC-Vpa-130302 Vicugna pacos 35.29 5.00e-11 61.60
IUUC-Vvi-131424 Vitis vinifera 56.48 1.00e-51 196.00
IUUC-Xtr-132159 Xenopus tropicalis 35.71 1.00e-10 60.10
IUUC-Xma-134100 Xiphophorus maculatus 32.29 1.00e-11 63.90
IUUC-Yli-134410 Yarrowia lipolytica 30.26 4.00e-08 52.40
Created Date 25-Jun-2017

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