iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-006770

UUCD1 version

UUC-ArT-00198

Ensembl Protein ID

AT3G60300.1

UniProt Accession

Q4TU20; Q4TU20_ARATH

Genbank Protein ID

AAY57602.1; AEE80040.1

Protein Name

RING finger family protein; RWD domain-containing protein

Genbank Nucleotide ID

DQ059116; CP002686

Gene Name

At3g60300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G60300	AT3G60300.2	AT3G60300.2
AT3G60300	AT3G60300.1	AT3G60300.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
PINA	HINT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	27.00	5.00e-17	86.70	IUUC-Hsa-045739

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MTEEEVAMEV EALEAVYSED CVILDSYPPH LHLHIKPRTA EISSQQFVEA VVRFQAGSKY 60
PDEPPRISLI ESKGLDEQRQ KLLIGIVQEK ASQLSSSLML VELCEEAVER LTIMNHPEGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTACTTATC GAGAATGTAG AAACTTCGGG GATTAGAAGT TAGGGAAAAA GGGTGAATTT 60
GAGAAAAAAC TATTTAATTT GGACAAAATC AGAATTATTA TATAGTATTG GGCCGTTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006575--RWD-domain
IPR016135--UBQ-conjugating_enzyme/RWD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50908--RWD
PS50089--ZF_RING_2

Pfam

PF05773--RWD

SMART

SM00184--RING
SM00591--RWD

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001954	Ailuropoda melanoleuca	29.29	3.00e-16	79.00
IUUC-Atr-002830	Amborella trichopoda	45.39	5.00e-70	257.00
IUUC-Apl-003293	Anas platyrhynchos	27.55	1.00e-14	73.60
IUUC-Aca-005092	Anolis carolinensis	27.97	1.00e-16	80.50
IUUC-Aly-005434	Arabidopsis lyrata	82.13	1.00e-124	438.00
IUUC-Ame-011754	Astyanax mexicanus	28.69	2.00e-12	67.00
IUUC-Bta-012592	Bos taurus	27.59	2.00e-17	82.80
IUUC-Bdi-015061	Brachypodium distachyon	49.47	2.00e-74	272.00
IUUC-Bol-015743	Brassica oleracea	78.87	3.00e-121	427.00
IUUC-Bra-018072	Brassica rapa	79.17	3.00e-116	410.00
IUUC-Cja-018930	Callithrix jacchus	26.15	3.00e-18	85.90
IUUC-Cfa-020156	Canis familiaris	26.15	5.00e-18	84.70
IUUC-Cpo-021290	Cavia porcellus	28.74	6.00e-17	81.30
IUUC-Csa-023214	Chlorocebus sabaeus	27.03	4.00e-19	88.60
IUUC-Cin-025416	Ciona intestinalis	25.13	4.00e-13	68.60
IUUC-Csv-026360	Ciona savignyi	29.77	2.00e-06	46.60
IUUC-Dre-028670	Danio rerio	26.25	2.00e-08	53.10
IUUC-Dno-029970	Dasypus novemcinctus	25.97	1.00e-17	84.00
IUUC-Dor-030152	Dipodomys ordii	25.77	4.00e-10	58.90
IUUC-Dme-031914	Drosophila melanogaster	26.77	2.00e-11	62.40
IUUC-Ete-033105	Echinops telfairi	24.56	2.00e-14	73.20
IUUC-Eca-033800	Equus caballus	27.69	2.00e-18	86.30
IUUC-Eeu-034525	Erinaceus europaeus	31.93	5.00e-08	51.60
IUUC-Fca-035644	Felis catus	27.31	4.00e-20	92.00
IUUC-Fal-037121	Ficedula albicollis	27.38	4.00e-15	75.50
IUUC-Gmo-039444	Gadus morhua	34.13	1.00e-10	60.50
IUUC-Gga-041221	Gallus gallus	27.49	4.00e-09	55.10
IUUC-Gac-042354	Gasterosteus aculeatus	26.36	2.00e-15	76.30
IUUC-Gma-043721	Glycine max	54.04	4.00e-84	304.00
IUUC-Ggo-044879	Gorilla gorilla	25.87	7.00e-20	91.30
IUUC-Hsa-045739	Homo sapiens	26.25	2.00e-20	92.80
IUUC-Itr-047915	Ictidomys tridecemlineatus	27.02	2.00e-15	76.60
IUUC-Lch-050277	Latimeria chalumnae	27.82	5.00e-10	58.50
IUUC-Lpe-051139	Leersia perrieri	50.91	4.00e-74	270.00
IUUC-Laf-053559	Loxodonta africana	25.48	1.00e-20	94.00
IUUC-Mcc-055367	Macaca mulatta	29.44	2.00e-17	82.80
IUUC-Meu-056730	Macropus eugenii	32.45	1.00e-13	70.50
IUUC-Mtr-058418	Medicago truncatula	53.62	9.00e-89	319.00
IUUC-Mga-060090	Meleagris gallopavo	28.49	9.00e-09	53.90
IUUC-Mmr-060618	Microcebus murinus	26.25	2.00e-19	89.70
IUUC-Mdo-063084	Monodelphis domestica	29.50	6.00e-14	71.60
IUUC-Mmu-063854	Mus musculus	27.59	5.00e-18	85.10
IUUC-Mac-064922	Musa acuminata	51.85	6.00e-82	296.00
IUUC-Mpu-066419	Mustela putorius furo	28.85	5.00e-18	85.10
IUUC-Mlu-067289	Myotis lucifugus	33.11	7.00e-16	77.80
IUUC-Nle-069090	Nomascus leucogenys	25.87	2.00e-19	89.70
IUUC-Opr-070601	Ochotona princeps	28.08	2.00e-16	79.30
IUUC-Ont-072434	Oreochromis niloticus	27.31	4.00e-15	75.10
IUUC-Ocu-074855	Oryctolagus cuniculus	26.64	6.00e-17	81.30
IUUC-Oba-075792	Oryza barthii	49.82	3.00e-77	281.00
IUUC-Obr-076917	Oryza brachyantha	49.12	1.00e-76	279.00
IUUC-Ogl-077872	Oryza glaberrima	48.28	2.00e-75	275.00
IUUC-Ogu-078151	Oryza glumaepatula	48.94	6.00e-77	280.00
IUUC-Oin-079465	Oryza indica	48.94	1.00e-76	279.00
IUUC-Olo-080907	Oryza longistaminata	49.59	1.00e-64	240.00
IUUC-Ome-081752	Oryza meridionalis	48.94	7.00e-76	276.00
IUUC-Oni-082420	Oryza nivara	48.94	1.00e-76	279.00
IUUC-Opu-083810	Oryza punctata	50.88	7.00e-78	283.00
IUUC-Oru-085177	Oryza rufipogon	49.82	3.00e-77	281.00
IUUC-Ola-087231	Oryzias latipes	30.95	1.00e-12	65.50
IUUC-Oga-088963	Otolemur garnettii	26.92	3.00e-19	89.40
IUUC-Oar-089292	Ovis aries	29.77	1.00e-19	90.10
IUUC-Ptr-091214	Pan troglodytes	25.87	1.00e-19	90.10
IUUC-Pan-092823	Papio anubis	27.03	2.00e-19	89.70
IUUC-Pfo-096406	Poecilia formosa	29.71	1.00e-13	70.90
IUUC-Pab-098212	Pongo abelii	26.25	9.00e-21	94.00
IUUC-Pop-099369	Populus trichocarpa	58.12	4.00e-95	340.00
IUUC-Pca-100897	Procavia capensis	24.42	7.00e-16	77.80
IUUC-Ppe-101702	Prunus persica	58.75	1.00e-92	332.00
IUUC-Pva-102899	Pteropus vampyrus	28.46	3.00e-18	85.50
IUUC-Rno-105369	Rattus norvegicus	28.74	3.00e-18	85.90
IUUC-Sha-107344	Sarcophilus harrisii	29.50	8.00e-14	70.90
IUUC-Smo-109636	Selaginella moellendorffii	48.08	4.00e-38	149.00
IUUC-Sit-109795	Setaria italica	49.64	5.00e-76	276.00
IUUC-Sly-111014	Solanum lycopersicum	59.41	8.00e-91	327.00
IUUC-Stu-112139	Solanum tuberosum	59.41	1.00e-92	332.00
IUUC-Sar-113487	Sorex araneus	30.61	2.00e-04	40.00
IUUC-Sbi-114714	Sorghum bicolor	50.19	3.00e-73	268.00
IUUC-Ssc-115465	Sus scrofa	28.35	3.00e-15	75.90
IUUC-Tgu-117113	Taeniopygia guttata	28.30	5.00e-16	78.20
IUUC-Tsy-119186	Tarsius syrichta	48.39	2.80e-02	32.30
IUUC-Tni-120219	Tetraodon nigroviridis	36.11	2.00e-06	44.30
IUUC-Tca-121748	Theobroma cacao	49.16	1.00e-94	338.00
IUUC-Tae-123014	Triticum aestivum	50.18	7.00e-76	276.00
IUUC-Tbe-127584	Tupaia belangeri	26.80	2.00e-04	40.00
IUUC-Ttr-128244	Tursiops truncatus	27.97	5.00e-17	81.60
IUUC-Vpa-130354	Vicugna pacos	28.74	1.00e-16	80.50
IUUC-Xtr-132402	Xenopus tropicalis	28.12	4.00e-12	65.10
IUUC-Xma-133442	Xiphophorus maculatus	29.71	1.00e-13	70.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence