iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048391

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01095362

Gene Name

TBL3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000012964.2	ENSSTOT00000012969.2	ENSSTOP00000011622.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-55	182.8	519	558
UBD/Beta-Prp	1.10e-96	323.5	413	639

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH  + +c++f +    l+++s Dgtik+W l ++ +lk+
   Q: 519  GHRRGLWCVQFsPMdQVLATASADGTIKLWALQDFSCLKT 558
           8999*******977789*******************9986 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls...........tgkcvhtlk....ghedsvlslsfspsgdklvsGshdr 116
           ++++ sgh+  v ++++s+ ++ +lvtgs+D t+k+w+l             +++v   +     h++++ s+++ p+++ l++Gs+dr
   Q: 413  CVAQGSGHTHSVGTICCSRLKEsFLVTGSQDCTVKLWPLPeallskstapdGSSIVLQAQatqrCHDKDINSVAVAPNDKLLATGSQDR 501
           678889***********998778**************6655666677777666666555555558************************ PP
   S: 117  tirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvk 205
           t+++w l++   l  ++sgh++  +cv+++p +++l+++s+D+t++lW l+  ++l+t++g h+ sv +++f s g++l+s + dg vk
   Q: 502  TAKLWALPQCHLLG-VFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEG-HDASVLKVAFVSRGTQLLSSGSDGLVK 588
           *************9.*********************************************9.*************************** PP
   S: 206  lwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgd 255
           lw ++++ecvrtl +h+d v+ ++ s+ d+r v+g+sD  + +W d++  +
   Q: 589  LWTIKNNECVRTLDAHEDKVWGLHCSQLDDRAVTGASDSCVILWkDVTEAE 639
           ********************************************8766554 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MAEAASGVSR FKANYAIERK MEPFYKGGKV QLDQPGRHLF CVCGTRVNIL DVASGAVLRS 60
LEQEDQEDIT AFDLSPDDEV LVTASRALLL AQWAWREGSI TRLWKAVHTA PVATMAFDPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGAGG CCGCGTCCGG AGTGAGCCGC TTCAAGGCGA AGTAAGCCCA GCGCGGGAGA 60
CGGGTTCGCT GCAGGAAGCG TCCGCGGCGG GCCGAGCGCG CGTTCGGGTC GGAGAGGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	35.34	7.00e-143	501.00
IUUC-Aml-002376	Ailuropoda melanoleuca	90.35	0.00e+00	1415.00
IUUC-Atr-002486	Amborella trichopoda	37.92	1.00e-162	566.00
IUUC-Apl-003519	Anas platyrhynchos	62.28	0.00e+00	902.00
IUUC-Aca-004363	Anolis carolinensis	55.76	3.00e-147	514.00
IUUC-Aly-006152	Arabidopsis lyrata	35.91	2.00e-151	529.00
IUUC-Ath-006966	Arabidopsis thaliana	35.79	2.00e-151	529.00
IUUC-Ago-007746	Ashbya gossypii	30.35	5.00e-105	375.00
IUUC-Acl-008009	Aspergillus clavatus	29.38	4.00e-106	379.00
IUUC-Afl-008681	Aspergillus flavus	28.92	3.00e-94	339.00
IUUC-Afu-008798	Aspergillus fumigatus	29.52	8.00e-95	341.00
IUUC-Ani-009278	Aspergillus nidulans	28.01	9.00e-98	351.00
IUUC-Ang-009640	Aspergillus niger	29.01	1.00e-101	364.00
IUUC-Aor-010160	Aspergillus oryzae	28.92	4.00e-94	339.00
IUUC-Ate-010320	Aspergillus terreus	29.01	4.00e-105	375.00
IUUC-Ame-010930	Astyanax mexicanus	60.29	2.00e-75	274.00
IUUC-Bgr-012054	Blumeria graminis	29.00	1.00e-108	387.00
IUUC-Bta-012611	Bos taurus	89.86	0.00e+00	1397.00
IUUC-Bci-013797	Botrytis cinerea	31.26	4.00e-115	408.00
IUUC-Bdi-014384	Brachypodium distachyon	38.67	3.00e-161	561.00
IUUC-Bol-015097	Brassica oleracea	36.54	2.00e-150	525.00
IUUC-Bra-017798	Brassica rapa	36.28	7.00e-152	530.00
IUUC-Cel-018664	Caenorhabditis elegans	31.34	6.00e-120	424.00
IUUC-Cja-019092	Callithrix jacchus	90.09	0.00e+00	1462.00
IUUC-Cfa-021040	Canis familiaris	89.34	0.00e+00	1406.00
IUUC-Cpo-022529	Cavia porcellus	90.60	0.00e+00	1422.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	60.31	2.00e-46	177.00
IUUC-Csa-024205	Chlorocebus sabaeus	90.71	0.00e+00	1476.00
IUUC-Cin-025560	Ciona intestinalis	45.57	0.00e+00	728.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	30.47	3.00e-115	409.00
IUUC-Cne-027082	Cryptococcus neoformans	30.00	5.00e-113	402.00
IUUC-Cme-027159	Cyanidioschyzon merolae	24.78	6.00e-30	126.00
IUUC-Dre-028138	Danio rerio	53.11	0.00e+00	881.00
IUUC-Dno-029914	Dasypus novemcinctus	67.17	0.00e+00	838.00
IUUC-Dor-030685	Dipodomys ordii	78.83	0.00e+00	936.00
IUUC-Dse-031429	Dothistroma septosporum	29.30	2.00e-100	360.00
IUUC-Dme-031995	Drosophila melanogaster	32.60	6.00e-121	428.00
IUUC-Ete-033086	Echinops telfairi	90.65	0.00e+00	803.00
IUUC-Eca-034354	Equus caballus	92.32	0.00e+00	1427.00
IUUC-Eeu-034832	Erinaceus europaeus	87.89	0.00e+00	811.00
IUUC-Fca-036136	Felis catus	84.21	0.00e+00	1319.00
IUUC-Fal-036859	Ficedula albicollis	66.79	0.00e+00	1058.00
IUUC-Fox-037863	Fusarium oxysporum	30.59	7.00e-103	368.00
IUUC-Fso-038389	Fusarium solani	31.15	3.00e-114	405.00
IUUC-Gmo-038711	Gadus morhua	58.07	0.00e+00	910.00
IUUC-Ggr-039820	Gaeumannomyces graminis	28.68	5.00e-107	382.00
IUUC-Gga-040263	Gallus gallus	66.17	0.00e+00	1086.00
IUUC-Gac-041291	Gasterosteus aculeatus	61.62	0.00e+00	1031.00
IUUC-Gma-044328	Glycine max	39.69	1.00e-168	586.00
IUUC-Ggo-044693	Gorilla gorilla	90.46	0.00e+00	1446.00
IUUC-Hsa-046048	Homo sapiens	90.71	0.00e+00	1448.00
IUUC-Hvu-047608	Hordeum vulgare	37.84	6.00e-160	557.00
IUUC-Kpa-049209	Komagataella pastoris	32.58	1.00e-119	423.00
IUUC-Lch-050085	Latimeria chalumnae	62.75	0.00e+00	998.00
IUUC-Lpe-050945	Leersia perrieri	38.09	2.00e-157	549.00
IUUC-Loc-052679	Lepisosteus oculatus	65.21	0.00e+00	1088.00
IUUC-Laf-053685	Loxodonta africana	88.97	0.00e+00	1360.00
IUUC-Mcc-055861	Macaca mulatta	90.71	0.00e+00	1449.00
IUUC-Meu-056820	Macropus eugenii	70.60	0.00e+00	947.00
IUUC-Mor-057234	Magnaporthe oryzae	28.48	1.00e-105	377.00
IUUC-Mpo-057456	Magnaporthe poae	29.91	3.00e-86	312.00
IUUC-Mtr-058122	Medicago truncatula	39.21	5.00e-169	588.00
IUUC-Mla-058980	Melampsora laricipopulina	27.79	3.00e-93	336.00
IUUC-Mga-060080	Meleagris gallopavo	65.25	0.00e+00	1077.00
IUUC-Mvi-060338	Microbotryum violaceum	35.45	8.00e-144	504.00
IUUC-Mmr-060762	Microcebus murinus	90.72	0.00e+00	1422.00
IUUC-Mdo-061975	Monodelphis domestica	74.87	0.00e+00	1147.00
IUUC-Mmu-064038	Mus musculus	89.61	0.00e+00	1411.00
IUUC-Mac-065189	Musa acuminata	36.14	5.00e-158	551.00
IUUC-Mpu-066526	Mustela putorius furo	89.73	0.00e+00	1399.00
IUUC-Mlu-067716	Myotis lucifugus	89.36	0.00e+00	1482.00
IUUC-Nfi-068474	Neosartorya fischeri	29.81	7.00e-98	351.00
IUUC-Ncr-068826	Neurospora crassa	28.45	3.00e-96	346.00
IUUC-Nle-069832	Nomascus leucogenys	91.45	0.00e+00	1484.00
IUUC-Opr-071183	Ochotona princeps	81.53	0.00e+00	1293.00
IUUC-Ont-072371	Oreochromis niloticus	63.07	0.00e+00	1028.00
IUUC-Oan-073491	Ornithorhynchus anatinus	65.83	0.00e+00	933.00
IUUC-Oba-075963	Oryza barthii	37.55	2.00e-160	559.00
IUUC-Obr-076173	Oryza brachyantha	38.05	4.00e-158	551.00
IUUC-Ogl-077692	Oryza glaberrima	37.42	3.00e-160	558.00
IUUC-Ogu-078965	Oryza glumaepatula	37.55	2.00e-160	559.00
IUUC-Oin-079708	Oryza indica	37.55	7.00e-161	560.00
IUUC-Olo-080679	Oryza longistaminata	37.38	6.00e-158	551.00
IUUC-Oni-082960	Oryza nivara	37.42	1.00e-160	560.00
IUUC-Opu-083282	Oryza punctata	37.00	2.00e-153	536.00
IUUC-Oru-085224	Oryza rufipogon	37.55	1.00e-160	560.00
IUUC-Osa-085320	Oryza sativa	37.55	1.00e-160	560.00
IUUC-Ola-086370	Oryzias latipes	57.22	5.00e-131	461.00
IUUC-Olu-087814	Ostreococcus lucimarinus	32.94	6.00e-100	358.00
IUUC-Oga-088458	Otolemur garnettii	88.29	0.00e+00	1477.00
IUUC-Oar-090032	Ovis aries	82.10	0.00e+00	988.00
IUUC-Ptr-090749	Pan troglodytes	90.09	0.00e+00	1431.00
IUUC-Pan-091691	Papio anubis	87.61	0.00e+00	1391.00
IUUC-Psi-093200	Pelodiscus sinensis	65.86	0.00e+00	1075.00
IUUC-Pma-094165	Petromyzon marinus	52.55	0.00e+00	650.00
IUUC-Pno-095048	Phaeosphaeria nodorum	32.05	1.00e-91	330.00
IUUC-Ppa-095336	Physcomitrella patens	40.85	3.00e-163	568.00
IUUC-Pfo-096132	Poecilia formosa	62.33	0.00e+00	994.00
IUUC-Pab-097855	Pongo abelii	90.09	0.00e+00	1466.00
IUUC-Pop-099434	Populus trichocarpa	36.59	6.00e-153	534.00
IUUC-Pca-100232	Procavia capensis	87.84	9.00e-172	597.00
IUUC-Ppe-101665	Prunus persica	36.96	3.00e-158	552.00
IUUC-Pva-102178	Pteropus vampyrus	89.96	0.00e+00	1427.00
IUUC-Pgr-103288	Puccinia graminis	29.35	2.00e-82	300.00
IUUC-Ptt-103808	Puccinia triticina	31.17	1.00e-81	297.00
IUUC-Pte-104205	Pyrenophora teres	30.80	2.00e-108	387.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	29.68	2.00e-99	356.00
IUUC-Rno-105617	Rattus norvegicus	89.86	0.00e+00	1416.00
IUUC-Sce-106281	Saccharomyces cerevisiae	30.13	4.00e-107	382.00
IUUC-Sha-107378	Sarcophilus harrisii	73.93	0.00e+00	1135.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	34.47	6.00e-123	434.00
IUUC-Spo-108361	Schizosaccharomyces pombe	33.58	2.00e-119	422.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	31.42	1.00e-119	424.00
IUUC-Smo-109257	Selaginella moellendorffii	39.13	3.00e-160	558.00
IUUC-Sit-110258	Setaria italica	37.41	2.00e-164	572.00
IUUC-Sly-111521	Solanum lycopersicum	37.20	5.00e-156	545.00
IUUC-Stu-112718	Solanum tuberosum	47.14	4.00e-34	136.00
IUUC-Sar-113586	Sorex araneus	78.53	7.00e-65	241.00
IUUC-Sbi-114768	Sorghum bicolor	38.39	2.00e-165	575.00
IUUC-Sre-115159	Sporisorium reilianum	33.95	9.00e-96	344.00
IUUC-Ssc-116342	Sus scrofa	68.73	0.00e+00	942.00
IUUC-Tgu-117320	Taeniopygia guttata	64.79	0.00e+00	1013.00
IUUC-Tru-118024	Takifugu rubripes	61.30	0.00e+00	984.00
IUUC-Tni-119971	Tetraodon nigroviridis	62.09	0.00e+00	997.00
IUUC-Tca-121248	Theobroma cacao	37.90	3.00e-160	558.00
IUUC-Tre-122079	Trichoderma reesei	30.53	1.00e-104	374.00
IUUC-Tvi-122554	Trichoderma virens	30.50	1.00e-104	374.00
IUUC-Tae-125865	Triticum aestivum	37.58	2.00e-157	549.00
IUUC-Tur-126436	Triticum urartu	36.38	5.00e-130	457.00
IUUC-Tme-126942	Tuber melanosporum	31.18	1.00e-110	394.00
IUUC-Tbe-128000	Tupaia belangeri	90.68	3.00e-87	316.00
IUUC-Ttr-128964	Tursiops truncatus	89.10	0.00e+00	1416.00
IUUC-Uma-129473	Ustilago maydis	32.34	6.00e-104	372.00
IUUC-Vda-129749	Verticillium dahliae	30.40	1.00e-98	354.00
IUUC-Vvi-131511	Vitis vinifera	39.06	4.00e-161	561.00
IUUC-Xtr-132816	Xenopus tropicalis	56.58	0.00e+00	900.00
IUUC-Xma-133672	Xiphophorus maculatus	62.36	0.00e+00	1028.00
IUUC-Yli-134602	Yarrowia lipolytica	35.11	2.00e-138	485.00
IUUC-Zma-135976	Zea mays	36.93	9.00e-155	540.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence