iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044187

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000847

Gene Name

LOC100788171; GLYMA_14G049700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA14G05430	GLYMA14G05430.1	GLYMA14G05430.1
GLYMA14G05430	GLYMA14G05430.2	GLYMA14G05430.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.80e-30	103.1	547	584
E3 activity/RING/U-box	1.90e-08	35.9	46	110
UBD/Beta-Prp	1.20e-40	141.2	371	672

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH   v+ ++f s++ l+s+s D t+++WD++++ +++
   Q: 547  GHRKAVSYVKFlSNDELASASTDSTLRLWDVKENLPVR 584
           79999******98899**************99887765 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawc 69
           ++flCpI +++ +d   +++G+++   +I  +l+++   cP +++ lt+++l Pn  l +l ++  
   Q: 46   KDFLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSD-CPCCGHYLTNTNLFPNFLLDKLLKKTS 110
           68*********************************999.****************99987776655 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkl........lrslsgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghe 94
            + ++++ f  d++l+at++ +++ikv+d++            + ++s  + + +++++++ +k  ++++   +++ vwd+ t+k ++ +++he
   Q: 371  ANIVSSIEFDCDDDLFATAGVSRRIKVFDFSAVVNeptdahcpVVEMSTRS-KLSCLSWNKYAKnQIASSDYEGIVTVWDVTTRKSLMEYEEHE 463
           56788999999********************95558888888777777766.69*****99987556666666********************* PP
   S: 95   dsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdl.ktgkllrtltgghtdsvys 185
           ++++s++fs+++ + lvsGs+d  +++w ++++  + +++   ++ ++cv+++p + n+++ Gs+D  +  +dl +  + ++ ++g h ++v  
   Q: 464  KRAWSVDFSRTDpSMLVSGSDDCKVKIWCTNQEASVLNIDM--KANICCVKYNPGSgNYIAVGSADHHIHYYDLrNISRPVHVFSG-HRKAVSY 554
           **********888***************7777777754444..4559*******99******************556899*****9.******* PP
   S: 186  lsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn..............s 265
           ++f sn  el+s+s+d+t++lwd++++  vrt++gh +  + v ++  +e++++gs+ + ++++   ++++ + l+ h+              s
   Q: 555  VKFLSN-DELASASTDSTLRLWDVKENLPVRTFKGHANEKNFVGLTVSSEYIACGSETNEVFVY---HKEISRPLTCHRfgspdmddaedeagS 644
           *****8.6********************************************************...66666666666666799********99 PP
   S: 266  svisvavlsfgdnvlvlgsedskvniwk 293
            +is  +++ +++ ++++ + ++++++ 
   Q: 645  YFISAVCWKSDRPTILTANSQGTIKVLV 672
           9999999*****************9975 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MEELSAGPLV PAVVKPEASK GAAVAADTSA AASGGTFPAS TSEPDKDFLC PICMQIIKDA 60
FLTACGHSFC YMCIITHLRN KSDCPCCGHY LTNTNLFPNF LLDKLLKKTS ARQISKTASP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACCTCAAAT CTCAAAGAAG AAGAGCCACC ATACCCACAC GCCTGCCCCT TCTCTCTCTC 60
TCACTCCAAA ATCCCAAAAC CGAATTCACA TTCACAACCA CACCTCCGCA ATAAAATAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

gmx:100788171

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000885	Aegilops tauschii	70.42	0.00e+00	932.00
IUUC-Aml-001265	Ailuropoda melanoleuca	40.52	1.00e-126	446.00
IUUC-Apl-003796	Anas platyrhynchos	40.35	1.00e-119	423.00
IUUC-Aca-005078	Anolis carolinensis	39.76	5.00e-125	441.00
IUUC-Aly-006014	Arabidopsis lyrata	78.09	0.00e+00	1096.00
IUUC-Ath-007636	Arabidopsis thaliana	77.91	0.00e+00	1100.00
IUUC-Bta-012595	Bos taurus	40.58	4.00e-127	448.00
IUUC-Bdi-014152	Brachypodium distachyon	68.77	0.00e+00	942.00
IUUC-Bol-016380	Brassica oleracea	76.69	0.00e+00	1057.00
IUUC-Bra-017690	Brassica rapa	76.21	0.00e+00	1042.00
IUUC-Cja-018926	Callithrix jacchus	40.58	6.00e-127	448.00
IUUC-Cfa-021088	Canis familiaris	40.86	4.00e-127	448.00
IUUC-Cpo-022442	Cavia porcellus	40.25	3.00e-121	428.00
IUUC-Csa-024119	Chlorocebus sabaeus	40.49	2.00e-126	446.00
IUUC-Cin-025375	Ciona intestinalis	38.87	2.00e-119	423.00
IUUC-Dre-028453	Danio rerio	39.91	8.00e-126	444.00
IUUC-Dno-029887	Dasypus novemcinctus	40.43	1.00e-126	447.00
IUUC-Eca-034403	Equus caballus	40.45	6.00e-120	424.00
IUUC-Fca-036475	Felis catus	40.61	5.00e-121	428.00
IUUC-Fal-037189	Ficedula albicollis	40.65	2.00e-125	442.00
IUUC-Gmo-039245	Gadus morhua	38.19	2.00e-120	426.00
IUUC-Gga-040806	Gallus gallus	40.33	4.00e-126	445.00
IUUC-Gac-042177	Gasterosteus aculeatus	38.14	5.00e-124	438.00
IUUC-Ggo-044430	Gorilla gorilla	36.78	3.00e-79	289.00
IUUC-Hsa-045853	Homo sapiens	40.58	6.00e-127	447.00
IUUC-Lch-050420	Latimeria chalumnae	40.37	6.00e-125	441.00
IUUC-Lpe-051219	Leersia perrieri	73.25	0.00e+00	942.00
IUUC-Loc-052728	Lepisosteus oculatus	40.52	3.00e-121	429.00
IUUC-Laf-053775	Loxodonta africana	40.67	1.00e-127	450.00
IUUC-Mtr-058555	Medicago truncatula	91.43	0.00e+00	1297.00
IUUC-Mga-059646	Meleagris gallopavo	40.16	2.00e-119	422.00
IUUC-Mmr-060990	Microcebus murinus	40.52	3.00e-126	446.00
IUUC-Mdo-062287	Monodelphis domestica	40.27	2.00e-126	446.00
IUUC-Mmu-064097	Mus musculus	40.58	5.00e-127	448.00
IUUC-Mac-065240	Musa acuminata	72.12	0.00e+00	989.00
IUUC-Mpu-066612	Mustela putorius furo	40.45	5.00e-120	424.00
IUUC-Mlu-067967	Myotis lucifugus	39.52	3.00e-118	419.00
IUUC-Nle-069543	Nomascus leucogenys	40.58	6.00e-127	448.00
IUUC-Ont-071522	Oreochromis niloticus	37.95	3.00e-121	429.00
IUUC-Oan-073409	Ornithorhynchus anatinus	40.22	3.00e-118	418.00
IUUC-Ocu-073756	Oryctolagus cuniculus	40.54	8.00e-123	434.00
IUUC-Oba-075149	Oryza barthii	74.17	0.00e+00	960.00
IUUC-Obr-076563	Oryza brachyantha	73.74	0.00e+00	957.00
IUUC-Ogl-077701	Oryza glaberrima	74.53	0.00e+00	964.00
IUUC-Ogu-078383	Oryza glumaepatula	74.53	0.00e+00	964.00
IUUC-Oin-079965	Oryza indica	70.20	0.00e+00	885.00
IUUC-Olo-080639	Oryza longistaminata	72.10	0.00e+00	948.00
IUUC-Ome-081821	Oryza meridionalis	73.71	0.00e+00	890.00
IUUC-Oni-082622	Oryza nivara	74.53	0.00e+00	964.00
IUUC-Opu-083295	Oryza punctata	74.37	0.00e+00	962.00
IUUC-Oru-084661	Oryza rufipogon	74.53	0.00e+00	964.00
IUUC-Osa-085766	Oryza sativa	74.53	0.00e+00	964.00
IUUC-Ola-086727	Oryzias latipes	39.30	2.00e-127	449.00
IUUC-Oga-088215	Otolemur garnettii	40.38	1.00e-122	433.00
IUUC-Oar-089880	Ovis aries	40.38	1.00e-122	433.00
IUUC-Ptr-090597	Pan troglodytes	40.58	6.00e-127	447.00
IUUC-Pan-091987	Papio anubis	40.58	6.00e-127	448.00
IUUC-Psi-094033	Pelodiscus sinensis	39.91	3.00e-121	428.00
IUUC-Pma-094587	Petromyzon marinus	39.07	1.00e-109	390.00
IUUC-Ppa-095401	Physcomitrella patens	61.96	0.00e+00	821.00
IUUC-Pfo-097388	Poecilia formosa	37.63	9.00e-123	434.00
IUUC-Pab-098029	Pongo abelii	40.58	4.00e-127	449.00
IUUC-Pop-099319	Populus trichocarpa	78.55	0.00e+00	1098.00
IUUC-Ppe-101250	Prunus persica	67.24	0.00e+00	866.00
IUUC-Pva-102407	Pteropus vampyrus	40.43	2.00e-123	436.00
IUUC-Rno-105312	Rattus norvegicus	40.58	6.00e-127	448.00
IUUC-Smo-109418	Selaginella moellendorffii	62.03	0.00e+00	793.00
IUUC-Sit-110248	Setaria italica	72.99	0.00e+00	954.00
IUUC-Sly-110895	Solanum lycopersicum	75.00	0.00e+00	1052.00
IUUC-Stu-112386	Solanum tuberosum	71.98	0.00e+00	1000.00
IUUC-Sbi-113962	Sorghum bicolor	66.99	0.00e+00	936.00
IUUC-Ssc-115987	Sus scrofa	30.52	2.00e-27	117.00
IUUC-Tgu-116471	Taeniopygia guttata	40.28	2.00e-125	442.00
IUUC-Tru-118231	Takifugu rubripes	39.48	2.00e-120	426.00
IUUC-Tsy-119415	Tarsius syrichta	39.94	3.00e-118	418.00
IUUC-Tni-120893	Tetraodon nigroviridis	39.33	4.00e-120	425.00
IUUC-Tca-121619	Theobroma cacao	77.62	0.00e+00	1093.00
IUUC-Tae-125524	Triticum aestivum	71.65	0.00e+00	960.00
IUUC-Tur-126557	Triticum urartu	71.07	0.00e+00	932.00
IUUC-Ttr-129100	Tursiops truncatus	39.81	6.00e-117	414.00
IUUC-Vpa-130613	Vicugna pacos	36.63	2.00e-102	366.00
IUUC-Vvi-131386	Vitis vinifera	73.94	0.00e+00	1018.00
IUUC-Xtr-132033	Xenopus tropicalis	40.67	6.00e-133	468.00
IUUC-Xma-133421	Xiphophorus maculatus	38.77	3.00e-126	445.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence