iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113779

Ensembl Protein ID

Sb03g037500.1

UniProt Accession

C5XMJ5; C5XMJ5_SORBI

Genbank Protein ID

EES03774.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G328900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g037500	Sb03g037500.1	Sb03g037500.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	3.30e-09	37.4	249	285

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMGFdreealqaLraannnleaAveyLld 40
           e+ +  lv+MGFdr++a+qaL+ +n++++ A++ Ll+
   Q: 249  ESSITALVSMGFDRSAAIQALALTNYDVNLASNILLE 285
           788999*****************************96 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MNGGLPGFHN APASRAVVVA AVLFSVPFGF RGRSHNLGLS YQSIYEKLSI WRLVTSLFAF 60
SSTPELIFGA ALLYYFRVFE RQIGSNKYAV FIIFSTMVSV LLQILALGYM KDPSLNPLTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACGGCG GGCTCCCTGG ATTCCGTACG CCACCTCACC GCTCGATCCT CCCGTTCTCC 60
TACTTTTTCG AAAAAAAAAA ACCGCTTCGA CTTCCCTTAT CTCTGCTCCT CTGTTACGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR022764--Peptidase_S54_rhomboid_dom
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF01694--Rhomboid
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004252--F:serine-type endopeptidase activity
GO:0043130--F:ubiquitin binding

KEGG

sbi:SORBI_03g037500

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002272	Ailuropoda melanoleuca	26.07	8.00e-20	90.10
IUUC-Apl-004075	Anas platyrhynchos	28.81	1.00e-23	103.00
IUUC-Aca-004595	Anolis carolinensis	27.96	5.00e-20	90.90
IUUC-Acl-008340	Aspergillus clavatus	33.02	1.00e-05	43.10
IUUC-Afu-009037	Aspergillus fumigatus	31.08	1.00e-07	49.70
IUUC-Ang-009777	Aspergillus niger	33.55	1.00e-07	49.30
IUUC-Ame-011242	Astyanax mexicanus	44.30	2.00e-10	58.20
IUUC-Bta-013487	Bos taurus	25.83	2.00e-19	89.00
IUUC-Bdi-014757	Brachypodium distachyon	79.17	2.00e-120	423.00
IUUC-Cja-018818	Callithrix jacchus	26.97	4.00e-20	91.30
IUUC-Cfa-021174	Canis familiaris	27.81	2.00e-23	102.00
IUUC-Cpo-021964	Cavia porcellus	25.67	3.00e-20	91.70
IUUC-Csa-024015	Chlorocebus sabaeus	25.67	2.00e-20	92.80
IUUC-Cho-024706	Choloepus hoffmanni	26.51	4.00e-17	81.30
IUUC-Cne-026916	Cryptococcus neoformans	35.40	1.00e-14	73.60
IUUC-Cme-027354	Cyanidioschyzon merolae	35.51	2.00e-10	58.50
IUUC-Dre-027633	Danio rerio	32.80	5.00e-18	84.30
IUUC-Dno-029418	Dasypus novemcinctus	26.00	2.00e-20	92.40
IUUC-Dor-030432	Dipodomys ordii	26.32	6.00e-20	90.50
IUUC-Eeu-034998	Erinaceus europaeus	27.04	4.00e-20	91.30
IUUC-Fca-036332	Felis catus	27.42	2.00e-21	95.90
IUUC-Gga-041116	Gallus gallus	27.12	4.00e-21	94.70
IUUC-Ggo-045366	Gorilla gorilla	27.30	2.00e-19	89.00
IUUC-Hsa-045893	Homo sapiens	25.67	4.00e-20	91.30
IUUC-Lpe-051354	Leersia perrieri	70.04	9.00e-91	327.00
IUUC-Loc-052511	Lepisosteus oculatus	28.67	3.00e-24	104.00
IUUC-Laf-053414	Loxodonta africana	25.33	2.00e-20	92.40
IUUC-Mcc-055111	Macaca mulatta	26.97	3.00e-19	88.20
IUUC-Meu-056905	Macropus eugenii	30.95	1.00e-16	79.70
IUUC-Mga-059639	Meleagris gallopavo	38.71	1.00e-05	41.60
IUUC-Mvi-060380	Microbotryum violaceum	35.04	2.00e-09	56.20
IUUC-Mmr-061267	Microcebus murinus	29.48	3.00e-12	64.70
IUUC-Mdo-062640	Monodelphis domestica	27.63	9.00e-22	96.70
IUUC-Mpu-066519	Mustela putorius furo	26.09	2.00e-21	95.50
IUUC-Nfi-068304	Neosartorya fischeri	27.96	2.00e-09	55.10
IUUC-Nle-070130	Nomascus leucogenys	31.58	4.00e-17	80.90
IUUC-Opr-070252	Ochotona princeps	26.00	3.00e-21	94.70
IUUC-Ont-072624	Oreochromis niloticus	33.08	6.00e-15	73.90
IUUC-Oan-072843	Ornithorhynchus anatinus	33.33	3.00e-14	70.90
IUUC-Ocu-073940	Oryctolagus cuniculus	25.66	3.00e-20	92.00
IUUC-Oba-075875	Oryza barthii	66.45	2.00e-95	340.00
IUUC-Obr-076147	Oryza brachyantha	79.24	5.00e-117	412.00
IUUC-Ogl-077322	Oryza glaberrima	77.16	5.00e-118	416.00
IUUC-Ogu-078996	Oryza glumaepatula	74.61	1.00e-107	381.00
IUUC-Oin-079646	Oryza indica	64.18	2.00e-91	327.00
IUUC-Olo-081041	Oryza longistaminata	65.37	2.00e-93	335.00
IUUC-Ome-081238	Oryza meridionalis	76.19	8.00e-109	385.00
IUUC-Oni-082310	Oryza nivara	68.71	8.00e-108	382.00
IUUC-Opu-083821	Oryza punctata	69.35	2.00e-90	323.00
IUUC-Oru-084586	Oryza rufipogon	71.11	5.00e-113	399.00
IUUC-Osa-085823	Oryza sativa	77.39	2.00e-87	314.00
IUUC-Oga-088600	Otolemur garnettii	26.32	2.00e-20	92.00
IUUC-Ptr-091509	Pan troglodytes	25.67	4.00e-20	91.30
IUUC-Pan-092468	Papio anubis	26.97	3.00e-19	88.60
IUUC-Psi-093075	Pelodiscus sinensis	26.76	7.00e-20	90.50
IUUC-Pno-095028	Phaeosphaeria nodorum	30.19	1.00e-06	46.20
IUUC-Pab-097915	Pongo abelii	27.30	2.00e-19	89.00
IUUC-Pca-100602	Procavia capensis	21.45	8.00e-10	57.00
IUUC-Pva-102466	Pteropus vampyrus	26.97	2.00e-19	89.40
IUUC-Sha-106739	Sarcophilus harrisii	26.58	4.00e-20	90.90
IUUC-Sit-110720	Setaria italica	81.65	3.00e-126	443.00
IUUC-Sar-113380	Sorex araneus	28.50	1.00e-11	62.80
IUUC-Ssc-115286	Sus scrofa	31.51	2.00e-13	68.20
IUUC-Tgu-117075	Taeniopygia guttata	28.86	1.00e-23	102.00
IUUC-Tsy-118933	Tarsius syrichta	31.05	3.00e-16	78.20
IUUC-Tae-125696	Triticum aestivum	79.17	1.00e-119	421.00
IUUC-Tur-126868	Triticum urartu	68.95	5.00e-90	322.00
IUUC-Ttr-128543	Tursiops truncatus	25.66	5.00e-19	87.80
IUUC-Vpa-130623	Vicugna pacos	21.33	2.00e-09	55.80
IUUC-Xma-133270	Xiphophorus maculatus	29.55	1.00e-11	63.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence