iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005742

Ensembl Protein ID

scaffold_501017.1

UniProt Accession

D7LP59; D7LP59_ARALL

Genbank Protein ID

EFH53478.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348717

Gene Name

RPL16; ARALYDRAFT_905313

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_501017.1	scaffold_501017.1	scaffold_501017.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	31.58	5.60e-01	33.10	IUUC-Hsa-046966

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MPVNKASWGK NRSSDSSRFS EGDRESINAI SIEKLLVMYL TRKSIMLLRK YLLVTESQVS 60
KYGFHIVKKK GDVLYPKRTK YSKYRKGRCS RGCKPDGTKL GFGRYGTKSC KAGRLSYRAI 120

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Nucleotide Sequence
(Fasta)

GAAGAAGCGG GCTAGTCCCC GAAAATGCCC GTTAATAAAG CAAGTTGGGG AAAAAATCGT 60
AGTTCAGATT CAAGTCGGTT CAGTGAGGGC GACCGCGAAA GTATAAATGC TATAAGCATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR016180--Ribosomal_L10e/L16
IPR000114--Ribosomal_L16
IPR020798--Ribosomal_L16_CS

PROSITE

PS00586--RIBOSOMAL_L16_1

Pfam

PF00252--Ribosomal_L16

PRINTS

PR00060--RIBOSOMALL16

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005840--C:ribosome
GO:0019843--F:rRNA binding
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

aly:ARALYDRAFT_905313

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bta-012436	Bos taurus	33.33	8.50e-02	32.00
IUUC-Cfa-020245	Canis familiaris	35.06	3.50e-02	33.10
IUUC-Csa-023556	Chlorocebus sabaeus	32.05	8.00e-03	35.00
IUUC-Cho-024489	Choloepus hoffmanni	34.21	2.40e-02	33.90
IUUC-Dno-029397	Dasypus novemcinctus	33.33	6.00e-03	35.80
IUUC-Fca-035687	Felis catus	31.17	1.80e-01	30.80
IUUC-Ggo-045328	Gorilla gorilla	30.77	3.20e-02	33.50
IUUC-Hsa-046966	Homo sapiens	30.77	3.20e-02	33.50
IUUC-Laf-053612	Loxodonta africana	32.89	1.30e-02	34.70
IUUC-Mmr-060713	Microcebus murinus	30.77	2.80e-02	33.50
IUUC-Mpu-065996	Mustela putorius furo	31.08	5.30e-02	32.30
IUUC-Nle-069583	Nomascus leucogenys	30.77	3.30e-02	33.50
IUUC-Oar-090012	Ovis aries	32.43	6.00e-02	32.30
IUUC-Ptr-090677	Pan troglodytes	30.77	3.30e-02	33.50
IUUC-Pan-092262	Papio anubis	32.05	1.10e-02	35.00
IUUC-Pab-098695	Pongo abelii	30.77	3.00e-02	33.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence