iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-051971

Ensembl Protein ID

ENSLOCP00000001043.1

UniProt Accession

W5LY36; W5LY36_LEPOC

Genbank Protein ID

ENSLOCP00000001043

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHAT01005585

Gene Name

TRIM50

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000000933.1	ENSLOCT00000001047.1	ENSLOCP00000001043.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.90e-06	26.2	16	57

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cle f + pl l+CgH +++ C+  +      + ++ +CP+Cr
   Q: 16   CPVCLELFAE-PLMLQCGHSYCKCCVRSM---AIDQFGQLQCPVCR 57
           ********99.999***********9555...67899********8 PP

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

MARRPSLESL EDQLLCPVCL ELFAEPLMLQ CGHSYCKCCV RSMAIDQFGQ LQCPVCRCEV 60
DGDSPPPNVT LAKIVDALRE LSGSQPEAEV CPQHHNPLSL YCEEDQTVIC GLCGSIGAHR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCGGC GGCCCAGCCT GGAGTCCCTG GAGGACCAGC TCCTGTGCCC GGTGTGCCTG 60
GAGTTGTTCG CCGAGCCCCT GATGCTGCAG TGCGGCCACT CGTACTGCAA GTGCTGCGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box
PF13445--zf-RING_UBOX

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00589--PRY
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001406	Ailuropoda melanoleuca	55.11	3.00e-158	551.00
IUUC-Apl-004051	Anas platyrhynchos	57.91	2.00e-160	558.00
IUUC-Aca-004755	Anolis carolinensis	32.91	5.00e-76	278.00
IUUC-Ame-010964	Astyanax mexicanus	76.14	0.00e+00	736.00
IUUC-Bta-012642	Bos taurus	56.00	2.00e-156	545.00
IUUC-Bci-013692	Botrytis cinerea	32.97	4.00e-08	53.10
IUUC-Cja-019011	Callithrix jacchus	53.40	3.00e-138	484.00
IUUC-Cfa-020270	Canis familiaris	53.11	3.00e-153	534.00
IUUC-Cpo-022458	Cavia porcellus	54.24	6.00e-151	527.00
IUUC-Csa-023478	Chlorocebus sabaeus	54.62	4.00e-152	531.00
IUUC-Dno-028894	Dasypus novemcinctus	55.53	2.00e-151	529.00
IUUC-Dor-030228	Dipodomys ordii	51.28	1.00e-131	463.00
IUUC-Eca-033497	Equus caballus	54.98	1.00e-155	542.00
IUUC-Eeu-034910	Erinaceus europaeus	47.52	2.00e-76	279.00
IUUC-Fca-036164	Felis catus	54.77	1.00e-156	546.00
IUUC-Gga-040573	Gallus gallus	47.71	7.00e-93	334.00
IUUC-Ggo-044471	Gorilla gorilla	54.74	4.00e-152	531.00
IUUC-Hsa-046039	Homo sapiens	54.74	3.00e-152	531.00
IUUC-Itr-048897	Ictidomys tridecemlineatus	54.60	7.00e-151	526.00
IUUC-Lch-050638	Latimeria chalumnae	61.54	2.00e-171	595.00
IUUC-Laf-054291	Loxodonta africana	53.89	2.00e-151	529.00
IUUC-Mcc-055708	Macaca mulatta	54.62	1.00e-151	529.00
IUUC-Meu-056670	Macropus eugenii	50.58	2.00e-87	316.00
IUUC-Mga-059415	Meleagris gallopavo	57.91	1.00e-162	566.00
IUUC-Mmr-061410	Microcebus murinus	55.11	2.00e-150	525.00
IUUC-Mdo-062252	Monodelphis domestica	33.95	1.00e-78	286.00
IUUC-Mmu-064094	Mus musculus	53.94	2.00e-152	531.00
IUUC-Mpu-065781	Mustela putorius furo	54.56	3.00e-157	548.00
IUUC-Mlu-067974	Myotis lucifugus	54.41	2.00e-153	535.00
IUUC-Nle-069000	Nomascus leucogenys	54.74	5.00e-152	530.00
IUUC-Opr-071216	Ochotona princeps	61.03	2.00e-73	269.00
IUUC-Oan-072738	Ornithorhynchus anatinus	32.71	5.00e-75	275.00
IUUC-Ocu-074859	Oryctolagus cuniculus	54.47	2.00e-151	528.00
IUUC-Oga-088285	Otolemur garnettii	53.86	1.00e-153	536.00
IUUC-Oar-090161	Ovis aries	50.21	4.00e-133	468.00
IUUC-Ptr-091672	Pan troglodytes	54.74	4.00e-152	531.00
IUUC-Pan-092870	Papio anubis	54.62	1.00e-151	529.00
IUUC-Psi-093742	Pelodiscus sinensis	60.96	1.00e-173	602.00
IUUC-Pab-098034	Pongo abelii	54.95	8.00e-153	533.00
IUUC-Pca-100618	Procavia capensis	30.99	3.00e-70	258.00
IUUC-Pva-103234	Pteropus vampyrus	54.11	5.00e-152	530.00
IUUC-Rno-105163	Rattus norvegicus	54.89	2.00e-153	535.00
IUUC-Sha-106575	Sarcophilus harrisii	49.31	3.00e-68	252.00
IUUC-Ssc-115600	Sus scrofa	55.32	4.00e-156	544.00
IUUC-Tbe-128151	Tupaia belangeri	55.38	1.00e-59	221.00
IUUC-Ttr-128947	Tursiops truncatus	55.34	2.00e-152	531.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence