iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078093

Ensembl Protein ID

OGLUM12G19640.1

UniProt Accession

A0A0E0BUW7; A0A0E0BUW7_9ORYZ

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM12G19640	OGLUM12G19640.1	OGLUM12G19640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.10e-17	65.1	100	185

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt..lt.........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
           ++vkvs++g+++++++dl+++ ++++L++a+++  l+         +++ s++a++YeD+dGDl+ l++D+++++++s       ++rl+i+k
   Q: 100  LFVKVSMDGAPYLRKIDLKVYKGYRELREALEAmfLCfsggaaadaAVNPSDFAVTYEDKDGDLM-LVGDVPFEMFIS------TCKRLRIMK 185
           68*******************************7644899999*999999***************.************......9******98 PP

Organism

Oryza glumaepatula

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MENLKATELR LGLPGTEEEA ALPPSTPRAG SKRALAGEPD QAKIKPAAAA KAQVVGWPPV 60
RSYRKSCLQP TTTTTKSKPP PAAAAAETQQ KEDVAGAGGL FVKVSMDGAP YLRKIDLKVY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTGCTTCTT CACATAGCTA GGGTTTGTTA GCTAGGTCTA TAAAACATCG CCATTGCTGC 60
TCAGCTAGCA GCCACGAAGA CAAAGTCAGA GGTCACACAG CTCATCGTCT CGAGCTACCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005805	Arabidopsis lyrata	50.25	3.00e-43	167.00
IUUC-Ath-007370	Arabidopsis thaliana	49.50	2.00e-45	175.00
IUUC-Bdi-014020	Brachypodium distachyon	65.83	5.00e-62	229.00
IUUC-Bol-015408	Brassica oleracea	48.99	9.00e-44	168.00
IUUC-Bra-017254	Brassica rapa	50.00	9.00e-45	172.00
IUUC-Cin-025204	Ciona intestinalis	32.56	2.80e-01	29.30
IUUC-Csv-025833	Ciona savignyi	31.25	1.40e-01	29.30
IUUC-Fal-037105	Ficedula albicollis	41.18	3.30e-01	28.90
IUUC-Gma-042959	Glycine max	50.72	2.00e-46	177.00
IUUC-Hvu-047853	Hordeum vulgare	69.76	7.00e-66	242.00
IUUC-Mtr-058771	Medicago truncatula	48.36	9.00e-44	169.00
IUUC-Mac-064820	Musa acuminata	52.58	7.00e-49	186.00
IUUC-Oba-075141	Oryza barthii	98.98	6.00e-88	315.00
IUUC-Oin-079780	Oryza indica	99.49	2.00e-87	313.00
IUUC-Oni-083078	Oryza nivara	99.49	2.00e-87	313.00
IUUC-Oru-084991	Oryza rufipogon	99.49	2.00e-87	313.00
IUUC-Osa-085321	Oryza sativa	99.49	2.00e-87	313.00
IUUC-Pop-098896	Populus trichocarpa	52.17	1.00e-47	181.00
IUUC-Ppe-101322	Prunus persica	51.23	5.00e-45	173.00
IUUC-Sit-109841	Setaria italica	67.84	4.00e-62	230.00
IUUC-Sly-110939	Solanum lycopersicum	50.49	5.00e-44	169.00
IUUC-Stu-112636	Solanum tuberosum	50.52	6.00e-45	172.00
IUUC-Sbi-114296	Sorghum bicolor	60.53	3.00e-57	214.00
IUUC-Tca-121147	Theobroma cacao	53.62	2.00e-46	177.00
IUUC-Tae-123807	Triticum aestivum	67.32	2.00e-65	241.00
IUUC-Vvi-131595	Vitis vinifera	53.17	9.00e-47	179.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence