iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007302

UUCD1 version

UUC-ArT-00540

Ensembl Protein ID

AT4G34370.1

UniProt Accession

Q949V6; Q9SZ02; ARI1_ARATH

Genbank Protein ID

CAD52883.1; CAB36714.1; CAB80154.1; AEE86364.1; AAK92801.1; AAM51339.1

Protein Name

Probable E3 ubiquitin-protein ligase ARI1; ARIADNE-like protein ARI1; Protein ariadne homolog 1; RING-type E3 ubiquitin transferase ARI1

Genbank Nucleotide ID

AJ510204; AL035521; AL161585; CP002687; AY050864; AY117264

Gene Name

ARI1; At4g34370; F10M10.140

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G34370	AT4G34370.1	AT4G34370.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
PINA	HINT	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	31.14	1.00e-60	230.00	IUUC-Cel-018521

Active Site

Position(s)	Description	Evidence
296	N/A	{ECO:0000250\|UniProtKB:Q9Y4X5}

Organism

Arabidopsis thaliana

Functional Description
(View)

Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates.

Protein Sequence
(Fasta)

MDDYFSAEEE ACYYSSDQDS LDGIDNEESE LQPLSSKRSN TQVITQESLL AAQREDLLRV 60
MELLSIKEHH ARTLLIHYQW DVEKLFAVFV EKGKDSLFSG AGVTVFDYQY GNSSFPQSSQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATGTATCG TTTTGCATAA AAGCAGTAAA AGTGAGAGAG AGAGAGAGAC AGATAGGAAT 60
CTTTGAGCGA TTCGTCTTCC TCCTCTATCG CCCTCTACTC TTCACCGGAA CTGTGATCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF01485--IBR

SMART

SM00647--IBR

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000151--C:ubiquitin ligase complex
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ath:AT4G34370

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cel-018521	Caenorhabditis elegans	31.14	6.00e-54	204.00
IUUC-Cin-025135	Ciona intestinalis	33.86	5.00e-60	224.00
IUUC-Csv-026243	Ciona savignyi	32.22	6.00e-57	214.00
IUUC-Dme-031903	Drosophila melanogaster	33.18	5.00e-66	244.00
IUUC-Eeu-034838	Erinaceus europaeus	26.51	7.00e-40	157.00
IUUC-Gma-043188	Glycine max	64.66	0.00e+00	768.00
IUUC-Obr-076492	Oryza brachyantha	59.63	0.00e+00	729.00
IUUC-Ppe-101740	Prunus persica	68.63	0.00e+00	778.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence