iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111147

Ensembl Protein ID

Solyc10g078900.1.1

UniProt Accession

K4D2D1; K4D2D1_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc10g078900.1	Solyc10g078900.1.1	Solyc10g078900.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.80e-07	31.2	124	179
E3 activity/RING/RING	8.40e-07	30.2	127	168

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPn 58
           +f C I l+l ++Pvv+++G+ +   ++ +wl   s+ k+cPv++ ++t ++++P 
   Q: 124  FFDCNICLDLSKEPVVTCCGHLFCWPCLYRWLhlHSDAKECPVCKGEVTMKNVIPI 179
           79******************************77677779**************97 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+  k+ p+v+ CgH+f+  Cl++w    ++ s +  CP+C+
   Q: 127  CNICLDLSKE-PVVTCCGHLFCWPCLYRW---LHLHSDAKECPVCK 168
           99******99.999***************...444788999****6 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MNLDLNLGPV ESPTDDSESV PATFPIEDMN LEDLLDGYRF REVVRQRRSR WRSALRNIPV 60
PAEARSIAME FIGRSESQTD DVIAEERPSE VENTCDNNNG YSHDEILGKK EDSEKVTSEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATCTTG ATCTGAATTT GGGACCTGTT GAAAGTCCTA CTGATGATTC AGAGTCTGTT 60
CCTGCAACAT TTCCCATTGA GGATATGAAT TTAGAGGATT TGTTAGATGG TTATCGATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000500	Aegilops tauschii	34.64	6.00e-36	144.00
IUUC-Atr-002855	Amborella trichopoda	61.68	7.00e-34	137.00
IUUC-Aly-006126	Arabidopsis lyrata	48.14	2.00e-77	282.00
IUUC-Ath-007143	Arabidopsis thaliana	48.39	5.00e-79	287.00
IUUC-Bdi-014503	Brachypodium distachyon	34.57	8.00e-34	137.00
IUUC-Bol-015635	Brassica oleracea	46.02	1.00e-75	275.00
IUUC-Bra-017049	Brassica rapa	46.40	7.00e-74	270.00
IUUC-Csv-026190	Ciona savignyi	40.68	8.00e-08	50.10
IUUC-Cgl-026743	Colletotrichum gloeosporioides	38.03	5.00e-09	55.10
IUUC-Dno-029843	Dasypus novemcinctus	51.85	2.00e-23	100.00
IUUC-Fox-037977	Fusarium oxysporum	35.14	2.00e-08	53.50
IUUC-Gma-042913	Glycine max	56.56	1.00e-96	345.00
IUUC-Hvu-047679	Hordeum vulgare	34.40	1.00e-36	146.00
IUUC-Kpa-049392	Komagataella pastoris	32.58	1.00e-08	52.80
IUUC-Lpe-051015	Leersia perrieri	35.15	9.00e-34	137.00
IUUC-Mtr-057874	Medicago truncatula	56.91	2.00e-96	345.00
IUUC-Mac-064953	Musa acuminata	42.13	4.00e-38	152.00
IUUC-Oba-075089	Oryza barthii	33.79	2.00e-34	140.00
IUUC-Obr-076527	Oryza brachyantha	44.90	4.00e-33	134.00
IUUC-Ogl-077589	Oryza glaberrima	33.79	2.00e-34	140.00
IUUC-Ogu-078192	Oryza glumaepatula	44.83	3.00e-33	135.00
IUUC-Oin-079384	Oryza indica	53.51	8.00e-33	134.00
IUUC-Olo-080296	Oryza longistaminata	53.51	1.00e-32	133.00
IUUC-Ome-081574	Oryza meridionalis	33.70	5.00e-35	141.00
IUUC-Oni-082269	Oryza nivara	46.26	3.00e-33	135.00
IUUC-Opu-083703	Oryza punctata	35.47	3.00e-34	139.00
IUUC-Oru-084734	Oryza rufipogon	45.58	4.00e-33	135.00
IUUC-Osa-085691	Oryza sativa	44.83	3.00e-33	135.00
IUUC-Olu-087623	Ostreococcus lucimarinus	48.68	6.00e-18	82.80
IUUC-Pop-099797	Populus trichocarpa	52.03	3.00e-88	318.00
IUUC-Ppe-101193	Prunus persica	66.57	5.00e-100	357.00
IUUC-Smo-109079	Selaginella moellendorffii	47.46	8.00e-27	114.00
IUUC-Sit-110715	Setaria italica	46.26	7.00e-35	141.00
IUUC-Stu-112419	Solanum tuberosum	99.02	0.00e+00	729.00
IUUC-Sbi-114164	Sorghum bicolor	31.61	3.00e-35	142.00
IUUC-Tca-121427	Theobroma cacao	55.50	1.00e-92	332.00
IUUC-Tae-125026	Triticum aestivum	33.16	1.00e-37	150.00
IUUC-Tur-126391	Triticum urartu	34.69	4.00e-33	134.00
IUUC-Vda-129983	Verticillium dahliae	40.38	1.00e-08	51.60
IUUC-Vvi-131195	Vitis vinifera	59.43	4.00e-97	347.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence