iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xma-133956

Ensembl Protein ID

ENSXMAP00000001083.1

UniProt Accession

M3ZFU1; M3ZFU1_XIPMA

Genbank Protein ID

ENSXMAP00000001083

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGAJ01017474

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXMAG00000001037.1	ENSXMAT00000001086.1	ENSXMAP00000001083.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	9.50e-17	61.0	446	490

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    l++C+ C + +H +Cl+++  +e pn e wiCp+C+
   Q: 446  EFCRVCKDGGE----LLCCDSCPSSYHIHCLNPP-LPEIPNGE-WICPRCT 490
           58*********....*******************.*******8.******6 PP

Organism

Xiphophorus maculatus

Protein Sequence
(Fasta)

MSGSEDDRDD YGAADDRLMQ DDEEEEISEN ESPKVKKKKK KAKKSRESKG SKRRSRREEL 60
TISSPEPMDM GGVEDVEDTG SAQRSESEGS DYTPGRKKKK KASSGKEKKR NSVPERSSKR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTAGAAGAG GGAGGGGGTG AGTTGACTAT TATGGTCTGT ACGTTGCAAG GTAACTATGC 60
AGAGTGGGGG AGGGGTGAGT GAAATGTGCG CGTATATGAA TGCGTGTGCA TGTGTGTGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028725--CHD4
IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0016581--C:NuRD complex
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006325--P:chromatin organization
GO:0031101--P:fin regeneration
GO:0006355--P:regulation of transcription, DNA-templated
GO:0051225--P:spindle assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011098	Astyanax mexicanus	87.04	0.00e+00	2551.00
IUUC-Cel-018683	Caenorhabditis elegans	56.50	0.00e+00	1297.00
IUUC-Cja-019510	Callithrix jacchus	72.12	0.00e+00	1835.00
IUUC-Cho-024361	Choloepus hoffmanni	81.69	0.00e+00	1346.00
IUUC-Csv-025847	Ciona savignyi	55.04	0.00e+00	1408.00
IUUC-Dno-029656	Dasypus novemcinctus	80.49	0.00e+00	2086.00
IUUC-Dme-032150	Drosophila melanogaster	62.56	0.00e+00	1437.00
IUUC-Fal-037312	Ficedula albicollis	83.56	0.00e+00	2106.00
IUUC-Gga-040216	Gallus gallus	77.70	0.00e+00	2526.00
IUUC-Gac-042478	Gasterosteus aculeatus	81.97	0.00e+00	2250.00
IUUC-Gma-043999	Glycine max	43.05	0.00e+00	739.00
IUUC-Loc-052144	Lepisosteus oculatus	86.30	0.00e+00	2173.00
IUUC-Mga-059633	Meleagris gallopavo	77.99	0.00e+00	2526.00
IUUC-Mmu-063672	Mus musculus	80.11	0.00e+00	2080.00
IUUC-Ont-072418	Oreochromis niloticus	89.76	0.00e+00	2837.00
IUUC-Ola-086880	Oryzias latipes	89.10	0.00e+00	2464.00
IUUC-Oar-090422	Ovis aries	80.45	0.00e+00	2079.00
IUUC-Psi-093530	Pelodiscus sinensis	82.26	0.00e+00	2135.00
IUUC-Ppa-095213	Physcomitrella patens	41.86	0.00e+00	719.00
IUUC-Pfo-097530	Poecilia formosa	98.77	0.00e+00	2997.00
IUUC-Pab-097959	Pongo abelii	78.23	0.00e+00	2038.00
IUUC-Rno-105692	Rattus norvegicus	80.28	0.00e+00	2080.00
IUUC-Sly-110976	Solanum lycopersicum	43.56	0.00e+00	739.00
IUUC-Ssc-115295	Sus scrofa	80.35	0.00e+00	2082.00
IUUC-Ttr-128478	Tursiops truncatus	76.84	0.00e+00	2053.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence