iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC e f    +d  +v +C H+fh+ Cl  w         + +CPlCr
   Q: 159  CSICIEKFseshEDIIRVPDCLHLFHQGCLFEW------LGLQNSCPLCR 202
           ********665544366677*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

METETLRTIE VSTMVSNRPK IVGVTNTVLI YQEEEIEELI EYESGIVANL GWYTSPLETN 60
AHILLNPRRL TRRVLTQLLD DQFLGQKIAH DVKDSFANDN SLRQPVTVTV YVTYIKERRV 120

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Nucleotide Sequence
(Fasta)

ATGGAGACTG AGACGTTGAG AACAATAGAA GTCTCTACGA TGGTATCAAA TCGACCTAAA 60
ATTGTAGGGG TTACGAACAC AGTCTTAATC TACCAAGAAG AAGAAATTGA AGAATTGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ath:AT5G37200

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015953	Brassica oleracea	44.84	1.00e-33	135.00
IUUC-Bra-016733	Brassica rapa	44.84	2.00e-28	118.00
IUUC-Csv-026018	Ciona savignyi	42.31	2.00e-10	59.30
IUUC-Pte-104093	Pyrenophora teres	44.64	5.00e-08	50.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence