iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pgr-103641

Ensembl Protein ID

EFP93439

UniProt Accession

E3LA80; E3LA80_PUCGT

Genbank Protein ID

EFP93439.1

Protein Name

UV excision repair protein Rad23

Genbank Nucleotide ID

DS178393

Gene Name

PGTG_19242

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGTG_19242	EFP93439	EFP93439

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.60e-23	81.1	147	186
ULD/UDP/UBQ/UBQ_PIM	4.80e-24	83.8	1	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlve.MGFdreealqaLraannnleaAveyLldg 41
           ++  ++++v+ MGF+re++ +a+raa+nn+++AveyL++g
   Q: 147  LQKTIDEIVNgMGFPREQVTKAMRAAFNNPDRAVEYLMTG 186
           57889********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkks 74
           mklt+ktl++++f l+v++++tve+lK +i++++g++peqqkLI++Gk+L Dd+t++++g+k++++ ++++ k+
   Q: 1    MKLTFKTLQKQQFVLDVEPSTTVEKLKSLIKESQGFEPEQQKLIFSGKVLADDKTIEQIGVKEKDFFVVMLIKP 74
           99***************************************************************988887665 PP

Organism

Puccinia graminis

Protein Sequence
(Fasta)

MKLTFKTLQK QQFVLDVEPS TTVEKLKSLI KESQGFEPEQ QKLIFSGKVL ADDKTIEQIG 60
VKEKDFFVVM LIKPKTAPTV PAPASVPSGA GAAASTSATA PTPAAAQPAT ATPSSTTAPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCCACCACC ACCTTCCTCC AACATTCAAC ATCCATATCC TTTCGCCTCT GCTGTGAACC 60
CCAACAACAA AAGGAACTGA TCACGAAAGA ATAACAAGAA GGGATACCAA CCCCACGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pgr:PGTG_19242

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	37.59	1.00e-32	132.00
IUUC-Aca-004704	Anolis carolinensis	36.08	3.00e-19	87.80
IUUC-Acl-008212	Aspergillus clavatus	40.96	1.00e-25	108.00
IUUC-Afu-008877	Aspergillus fumigatus	37.97	1.00e-43	169.00
IUUC-Cel-018364	Caenorhabditis elegans	29.69	8.00e-14	69.30
IUUC-Cin-025741	Ciona intestinalis	33.89	8.00e-27	112.00
IUUC-Csv-025823	Ciona savignyi	30.10	7.00e-19	85.90
IUUC-Cgl-026495	Colletotrichum gloeosporioides	37.70	3.00e-26	110.00
IUUC-Dre-028369	Danio rerio	45.52	1.00e-26	112.00
IUUC-Gma-044245	Glycine max	34.75	1.00e-46	178.00
IUUC-Hvu-047832	Hordeum vulgare	36.84	4.00e-31	127.00
IUUC-Lch-049719	Latimeria chalumnae	43.62	4.00e-28	117.00
IUUC-Loc-052355	Lepisosteus oculatus	41.75	5.00e-16	77.00
IUUC-Meu-056459	Macropus eugenii	37.07	6.00e-29	119.00
IUUC-Mor-057287	Magnaporthe oryzae	38.74	2.00e-26	111.00
IUUC-Mtr-058713	Medicago truncatula	34.06	8.00e-41	159.00
IUUC-Mla-058961	Melampsora laricipopulina	61.35	7.00e-105	372.00
IUUC-Mac-064724	Musa acuminata	34.28	3.00e-36	144.00
IUUC-Ncr-068685	Neurospora crassa	38.37	2.00e-29	121.00
IUUC-Nle-069846	Nomascus leucogenys	58.49	4.00e-15	73.90
IUUC-Ont-072484	Oreochromis niloticus	35.29	1.00e-29	122.00
IUUC-Oan-073572	Ornithorhynchus anatinus	34.54	4.00e-19	87.00
IUUC-Olu-087843	Ostreococcus lucimarinus	35.21	4.00e-31	127.00
IUUC-Oga-089075	Otolemur garnettii	34.43	2.00e-21	94.70
IUUC-Psi-093477	Pelodiscus sinensis	58.00	5.00e-14	70.50
IUUC-Ppa-095654	Physcomitrella patens	46.04	6.00e-28	116.00
IUUC-Pca-100348	Procavia capensis	36.68	6.00e-28	116.00
IUUC-Ppe-101830	Prunus persica	43.07	9.00e-24	102.00
IUUC-Ptt-103717	Puccinia triticina	88.32	2.00e-104	370.00
IUUC-Pte-104303	Pyrenophora teres	43.11	5.00e-24	103.00
IUUC-Pyt-104580	Pyrenophora triticirepentis	42.67	6.00e-24	103.00
IUUC-Sce-106214	Saccharomyces cerevisiae	35.86	9.00e-24	102.00
IUUC-Spo-108298	Schizosaccharomyces pombe	37.38	5.00e-55	206.00
IUUC-Sly-111480	Solanum lycopersicum	34.27	4.00e-45	173.00
IUUC-Sre-114894	Sporisorium reilianum	50.70	5.00e-16	77.00
IUUC-Tni-120486	Tetraodon nigroviridis	41.79	1.00e-22	99.00
IUUC-Tre-121911	Trichoderma reesei	38.10	1.00e-39	155.00
IUUC-Tur-126610	Triticum urartu	37.59	3.00e-33	135.00
IUUC-Tbe-127603	Tupaia belangeri	44.78	5.00e-24	103.00
IUUC-Uma-129484	Ustilago maydis	50.70	2.00e-15	75.50
IUUC-Vda-129946	Verticillium dahliae	39.89	3.00e-24	103.00
IUUC-Xtr-132679	Xenopus tropicalis	60.00	8.00e-15	73.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence